Bartonella henselae BM1374165: BM1374165_00867
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Entry
BM1374165_00867 CDS
T03309
Symbol
recJ_3
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bhs
Bartonella henselae BM1374165
Pathway
bhs03410
Base excision repair
bhs03430
Mismatch repair
bhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BM1374165_00867 (recJ_3)
03430 Mismatch repair
BM1374165_00867 (recJ_3)
03440 Homologous recombination
BM1374165_00867 (recJ_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhs03400
]
BM1374165_00867 (recJ_3)
DNA repair and recombination proteins [BR:
bhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BM1374165_00867 (recJ_3)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BM1374165_00867 (recJ_3)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BM1374165_00867 (recJ_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
QRPTase_C
CDC45
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
CDO46876
UniProt:
X5M4J8
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All DBs
Position
985070..986854
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AA seq
594 aa
AA seq
DB search
MHRSRYFLNVQSSACGQAWLDALDIQGINNARAISQKFGFPDQLARVLSARDVDESEAVA
FINPTLRTLMPDPKSFTDMQYAAERIVKAILKQEKVAVFGDYDVDGACSSALIARFLRYF
GVEVKIYIPDRIVEGYGPNEQAMRMLVQQGAHLIITVDCGANSPDAVKAARLAGADVVVL
DHHQMSEVHQEAVALVNPNRPDDFSGQGHLCAAGVVFVTLAWVHHLLRKKKFVEELPDLL
SMLDLVALATICDVVPLQGVNRAFVVKGLQVAHSMHNPGIAALTKVARIGEPLNSFHLGF
LLGPRINAGGRIGDQALGARLLSCEDKGEADRIAEQLNQLNQERQEMEAIQLAQAESYID
SLYQDREKPLSLVIAHQEWHPGIIGLLASRLKERFFCPVFAIALKEDGSGIGSGRSISGI
DLGALVREAVTLNLLEKGGGHSMAAGITIQSTKIEIFRKWLEERVSLNVSQLRAEKSLNI
DGCLSASGANKALFDMIEKAGPFGSGNTTPVFVLPSHRLMNLCEVGKGHLRFIMSNMEGK
KLQGIAFRAVGTSLGYFLSGNVGEMIHVAGNISLNYWNGNISPQLRVIDAAAVI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtctcgttattttctcaacgttcagtcttctgcgtgtggtcaggcttggtta
gatgcccttgatattcaagggataaataatgcgcgcgccatttctcaaaaatttggtttt
ccagatcaattagcccgtgttctctcggcaagagatgtggatgaatctgaagctgttgct
tttatcaatccaacattgcgcacacttatgcctgatccaaaaagttttacggatatgcaa
tacgcagcagagcgcatcgtgaaagctattctgaagcaagagaaagttgcagtttttggt
gattatgatgttgatggtgcttgttcatcggcactcatagcgcgctttttgcgttatttt
ggtgtcgaagtaaaaatttatattcctgatcgtattgttgaaggatatggcccgaatgag
caagcaatgaggatgttggtacaacaaggcgctcatttgattattacagttgattgtggt
gcgaacagtccagatgcagtaaaagcagcgaggcttgcaggtgctgatgttgtcgtttta
gatcatcatcaaatgtcagaggttcatcaagaagctgttgctcttgttaatcctaatcgc
ccagatgatttttctggacaggggcatttgtgtgctgctggcgttgtctttgtcacgtta
gcatgggttcatcatttattgcgaaagaagaaatttgtagaagaacttcctgatcttctc
agtatgcttgatcttgttgcattggcgaccatatgtgatgtcgttccattacaaggagtt
aatcgtgcttttgtggtaaaagggctccaagttgcgcattctatgcataatcctggaata
gcggctttaacaaaggttgcacgtataggtgaaccacttaatagttttcatttaggtttt
ttgttaggtcctagaattaatgcgggagggcgtattggcgatcaggctttgggagcacgt
ttgttgagctgtgaggataaaggggaagctgacagaatagcagaacaattgaatcaactg
aatcaagaacgtcaggaaatggaggccattcaattagcacaagcagaatcttatattgat
tctctttatcaagatcgagaaaaaccgctatcgcttgtaattgcccatcaagaatggcat
ccaggaatcattggtcttcttgcatcccgtttaaaagagcgttttttttgtcctgttttt
gccattgctttgaaagaagatggaagcggcataggatcaggacgctcaattagcggcata
gatttaggagcacttgttcgtgaagctgttacgttaaatttattagaaaaagggggggga
catagtatggcagcagggatcacaatccaatcgacaaaaattgaaatttttcgaaaatgg
ctggaagagagagtctctttaaatgtttcacagttgcgtgctgaaaagtctcttaatata
gatggttgcctttctgcttctggggccaataaagcgctttttgatatgattgaaaaagca
ggaccatttggttcggggaatacgacacctgtttttgttctgccttctcaccgattaatg
aatctgtgtgaggttggtaaagggcatctccgctttattatgtctaatatggaaggaaaa
aagctgcaaggaatagctttccgtgctgtagggacatcgcttggttattttctttctgga
aatgttggtgaaatgatccatgtggccggtaatattagcttaaattattggaatggaaat
atcagtccacaacttcgcgttattgatgcagctgcagtgatatga
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