Bartonella henselae BM1374165: BM1374165_01028
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Entry
BM1374165_01028 CDS
T03309
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bhs
Bartonella henselae BM1374165
Brite
KEGG Orthology (KO) [BR:
bhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhs03016
]
BM1374165_01028 (rnd)
Enzymes [BR:
bhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BM1374165_01028 (rnd)
Transfer RNA biogenesis [BR:
bhs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BM1374165_01028 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
CDO47031
UniProt:
X5M525
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All DBs
Position
1148058..1149317
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AA seq
419 aa
AA seq
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MRYKRFLTTICQDMRTKTQKKSQEKTNLNLSGYNRMMKLITQTTDLEIALATLRNSDFVT
IDTEFIRETTFWPQLCLIQLASPDTTVLIDPISQDIDLKAFFDLMVNKKIVKVFHAARQD
IETIYHLGGVIPSPLFDTQIAGSICGFGDSISYDQIVQRCTGYQLDKSSRFTDWSFRPLS
EKQLLYALADVTYLRDVYLLLKKQLEKNKRTHWMDDEIAVLLEPKTYDMPENEAWKKVKG
KIKKPRELAVLQKIAAWRERKARQYNIPRRHIIKDECLIEIAIQQPKDEADLKRLRSLNK
NWDKFSIAHTLIKAVHEGLEVDLATLPALPKHNPLNETSSAVIDLLKVLLKLVANENGIA
PKIIATSNDLEKIANGCIKKNIPAMNGWRYEIFGQKAEQMLKGKIGFYLSNGKINTKQL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacaaacgctttttaacaaccatttgtcaagatatgaggacaaagactcaaaaa
aaaagtcaagaaaagacaaatttaaatttatctggttataatagaatgatgaaacttatt
acacaaacaacagatcttgaaattgcacttgccactttacggaactctgattttgtaaca
atagacacagaatttatccgcgaaacaactttttggcctcaactgtgtttaatccagctt
gcatcaccagatacaacagttctgattgatccaatatcacaagatattgatctaaaagct
ttttttgatcttatggtaaataaaaaaattgttaaagtttttcacgctgcacgccaagat
attgaaacgatttaccatcttggaggtgtcattccctctcctcttttcgatacccaaata
gcaggatcaatctgtggatttggtgattctatctcttatgatcaaattgtacaacgctgc
acgggttatcaacttgataaatcatcccgctttacagactggagcttccgtcctctttca
gaaaaacaattactctatgcacttgctgatgtaacctatctaagagatgtttatctccta
ctgaaaaaacagctcgaaaaaaataaacgcacccactggatggatgatgaaatagcggtc
cttttagaacctaaaacctatgatatgccggaaaatgaagcgtggaaaaaagtgaaagga
aaaattaaaaaaccgcgtgaacttgccgtattacaaaaaatagcagcgtggcgtgaacgt
aaagcacgacaatataatattccacgtcgccatatcataaaagatgaatgtcttattgaa
attgccatccaacaaccaaaagatgaagctgacttgaaacgtttgcgcagtctgaacaaa
aattgggataaattctcaattgcacacacattaatcaaagctgtccacgagggcttagag
gttgatcttgcgactttacccgctcttccgaaacataatccacttaatgaaacatcatct
gccgttatcgatctgcttaaagtgttattaaaacttgttgcgaacgaaaacggcatcgca
ccgaaaattattgcaacttccaatgacttagaaaaaattgcaaacgggtgtataaaaaaa
aatattcccgctatgaatggttggcgctatgaaatatttggtcaaaaagctgaacaaatg
ctaaagggtaagataggattttatttgagcaatggaaaaataaacaccaaacagctttaa
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