Bartonella henselae BM1374165: BM1374165_01034
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Entry
BM1374165_01034 CDS
T03309
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhs
Bartonella henselae BM1374165
Pathway
bhs03030
DNA replication
bhs03430
Mismatch repair
bhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BM1374165_01034 (dnaE)
03430 Mismatch repair
BM1374165_01034 (dnaE)
03440 Homologous recombination
BM1374165_01034 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhs03032
]
BM1374165_01034 (dnaE)
03400 DNA repair and recombination proteins [BR:
bhs03400
]
BM1374165_01034 (dnaE)
Enzymes [BR:
bhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BM1374165_01034 (dnaE)
DNA replication proteins [BR:
bhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BM1374165_01034 (dnaE)
DNA repair and recombination proteins [BR:
bhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BM1374165_01034 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CDO47037
UniProt:
X5LZV5
LinkDB
All DBs
Position
complement(1155976..1159464)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSEDKSKIRDEKQPFPHFIHLRVHSAYSLLEGALKIPQIIQHAISDHTPAVAITDTNNLF
GALEFSQYCFSYGIQPIIGCQLTIDFGDGNDNPRLVKWRHPSDFCSIVLLAASEIGYAHL
VRLVSRAYLDKCDTDPPHIKADWLLSHNEGIIALTGGRGGPINFSLAEERKERAIERLIY
LKKIFDDRLYVELQRHGSFDQKVEAALIELAYAYEIPLVATNEAFFLNREGYEAHDALMA
VAEGQIVSNPDRKRVTPDHYLKSQEEMVALFSDLPEALENSVEIALRCHTATPTRKPILP
RFIEQSVDLNFTLEAEDRELLNQAKAGLKMRLKTIGLAEGYTITDYEQRLDYEISVITRM
QFSGYFLIVSDFIKWAKVHDIPVGPGRGSGAGSLVAYALMITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIHYVQKKYGRDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VEYLTKLVPAAPGSQVELADAIKDEPKFEEEKKKDPAIGRTLDIALQLEGLYRHASTHAA
GIVIGDRPLSELIPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDFVA
RKGIKINLSNIPLNDETTYAMMARGETVGIFQVESSGMRKALIGMKPDRIEDIIALVALY
RPGPMENIPIYNARKHGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLAGYSLGEA
DLLRRAMGKKIHTEMQKQRTRFVNGAVAGGVDKDQADIIFDLLAKFADYGFNKSHAAAYA
IISYQTAYMKAHHPVEFLAASMTYDMMNTEKLNDFRREALRLGIKVIAPCVQTSHRVFEV
GDNCIYYSLAAIKGVGEAVVDHIVVCRGNKVFKDLEDFCERIDPRIVNKRAMESLVCAGA
FDCFNIAREVLLASLGTLHARALRILDDNSSGQTDIFGITSVLKEPLILSQVSPWSLDEK
LHREFQAIGFYFSAHPLDEYQAILVKKRIQNWVNFANAVKAGATAARLAGTVVAKQVRKT
KSGKKMGIVHFSDTSGQYEAVLFSEALSDYEEILELGKSFIITVSAENRSEGVSLRLETA
QSLEKEAAQHHKMMRLFIKTVDMLPQIQQNLNPSGNGEVALILIQEDGLREVEITLPKRY
KVNSRVASALKSIQGVVDVELT
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaagataaaagtaaaatacgagatgaaaaacaaccttttcctcactttattcat
ttgagggtacactcagcttactcattgcttgaaggggctttaaaaatcccacaaattatt
caacatgcaatctcagatcatacaccagcggttgctattacggatacgaataatttattt
ggtgctttggaattttcgcaatattgtttttcttatggtattcaacccattataggttgt
caactcacaattgactttggagatggaaatgataatccgcgtttagttaaatggcgtcat
ccttctgatttttgttctattgttcttttagctgcaagcgagattggttatgctcattta
gttcgtcttgttagtcgtgcttatcttgataagtgcgatactgatcctcctcatatcaaa
gccgattggctgttgtcgcataatgaaggaatcattgctttgactggtgggagaggaggg
cctattaatttttctttggcagaagagagaaaagaacgtgctattgaacgcttaatttat
ttaaaaaagatttttgatgatcgcctttatgtggaattacaacggcatggctcttttgat
caaaaagtagaagctgcgcttattgagttggcgtatgcatatgaaattcctcttgttgca
acaaatgaggctttttttctaaacagagaagggtatgaagcccatgatgcgctgatggca
gttgcagaaggacaaattgtttctaatccagatcgcaaacgtgtgacgccagatcattat
ttgaagtcacaagaggaaatggttgcactgttttctgatcttccagaagctctggaaaac
agtgttgaaattgcattgcgttgtcatactgctacgccaactcgaaaaccaattttgcct
cgttttatagagcaatctgttgatttaaactttactttagaagcagaagatagagaattg
ttaaatcaggctaaagctggtttaaaaatgcgacttaaaacaattggactggctgaagga
tacacgattacagattatgagcagcggcttgattatgaaatttcagttattacgcgcatg
cagttttctggctattttcttattgtttcagattttataaaatgggcgaaagtccatgat
attcccgttggcccaggacgtggctctggtgctggttcacttgtggcttatgcattgatg
attaccgatgttgatccattgcgtttttctcttctctttgaaagatttctcaatccagat
cgtgtttctatgccagattttgatatcgatttttgtcaagaacggcgcgaagaagttatt
cattatgttcaaaaaaaatatggtcgtgatcaagtcgctcaaattattacgtttggtaaa
ttgcaggcacgtgcggtattgcgtgatgttgggcgtgttttagaagtgccgtatcgtcag
gtggaatatcttacaaagttggttcctgctgcgcctggaagtcaagttgagttggctgat
gctattaaggatgaaccgaaatttgaagaagaaaagaaaaaagatcctgctattggacgc
acattagatatagcgcttcagctggagggactttatcgtcatgcatcgacccatgctgca
ggaattgttatcggtgatcggccgctatcagaacttatcccgatgtaccgtgatcctcgt
tccgatatgcctgttacacaatttaacatgaaatatgttgaacaggctgggttggtaaaa
tttgattttcttggattaaaaacactgactgttttgaagatggcggtagattttgttgca
cgaaagggtatcaaaataaatttatcgaatatccctctgaatgatgaaacgacttatgcc
atgatggcacgtggtgaaacggttggcatatttcaagttgaaagttctggtatgcgtaag
gctcttattggcatgaagccagatcgtattgaagatattattgcccttgttgcgctttat
cgtcctggaccgatggagaatattccaatctataatgcacgcaaacatggggaagaggaa
attgcttctattcatcctaaaatagatcatttgattaaagaaacacaaggcgttattgta
taccaagaacaggtgatgcaaatcgctcaggtgcttgctggttattcgcttggagaagca
gatttattgcgtcgcgctatggggaaaaaaatccatacagaaatgcaaaaacagcgtacg
cgctttgtgaatggagctgttgctggtggtgttgataaggatcaggctgatattatcttt
gaccttttagcaaaatttgcagattacggttttaataaatcgcacgctgctgcttatgca
attatttcttatcaaacagcttatatgaaagcacatcatcccgttgagtttttagctgct
tcgatgacatatgatatgatgaataccgagaaattaaatgactttcggcgtgaggcatta
aggttgggtattaaagttattgcaccttgtgtgcaaacatcacatcgtgtttttgaggtt
ggtgataactgtatttattactctcttgccgccattaaaggtgtaggtgaagcggttgtt
gaccatattgttgtttgccgtggaaataaggtttttaaggatctagaagatttttgtgag
cgtattgatcctcgtattgttaataagcgtgcaatggaaagtttggtttgtgctggtgct
tttgattgttttaatattgcacgtgaagttttattggcaagccttggaacccttcatgcg
cgtgcacttcgtattctcgatgacaattctagcggacagactgatatatttgggataaca
agtgttttaaaagagcctttgatactatcgcaagtctctccttggtcactggatgaaaaa
cttcatcgagagtttcaagcaataggtttttacttttctgctcatcctctggatgagtat
caagctattcttgttaaaaaacgtattcagaattgggttaattttgccaatgctgttaaa
gctggcgcaactgctgctcggcttgctggaactgttgtggcaaagcaagtgcgtaaaaca
aaatctggtaagaaaatggggattgttcatttttctgatacgagtggacagtatgaggca
gttcttttttccgaggcgctttcggattatgaggagatattggaacttggaaaatctttt
atcattacggtgagtgcagaaaatcgctctgagggggttagtttgcgacttgagacggct
caatccttggaaaaggaagcagcacagcatcataaaatgatgcgtctctttatcaaaacg
gttgatatgcttccacaaattcaacaaaatttaaatcctagcggaaatggagaagtagcg
cttattttgattcaagaggatggattacgggaagttgaaattacgcttccaaagcggtat
aaggtaaattcgcgtgtggcaagtgctctaaaatcaattcagggtgttgtcgatgtggag
ttgacttaa
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