Bartonella henselae BM1374165: BM1374165_01149
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Entry
BM1374165_01149 CDS
T03309
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bhs
Bartonella henselae BM1374165
Pathway
bhs03420
Nucleotide excision repair
bhs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BM1374165_01149 (uvrD)
03430 Mismatch repair
BM1374165_01149 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhs03400
]
BM1374165_01149 (uvrD)
Enzymes [BR:
bhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BM1374165_01149 (uvrD)
DNA repair and recombination proteins [BR:
bhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BM1374165_01149 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BM1374165_01149 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
NUP120_helical_2
PcrA_UvrD_tudor
AAA_11
DUF4420
Tudor_1_RapA
DUF3553
Motif
Other DBs
NCBI-ProteinID:
CDO47146
UniProt:
X5M591
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All DBs
Position
1288812..1291148
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AA seq
778 aa
AA seq
DB search
MNNFSDHIPFFEDDSPPHKHENNSGLTNQNVTVKEKTQYSADYLEKLNPEQQQAVMNTEG
PLLVLAGAGTGKTRVLTTRISHILHSGLASPQQILAVTFTNKAAREMKMRIGELIGEIVE
GMPWLGTFHSIGAKILRRHAELVNLKSNFTILDSDDVTRLLKQLIQAEGLDDKRWPARNL
AIMIDSWKNQGLSPEHISESDAHSFGNGMGRELYHNYQHRLKSLNACDFGDLLLHSISIF
QHNPDILRDYHSKFRYILVDEYQDTNTAQYLWLRLLAQQPKGQHINLCCVGDDDQSIYGW
RGAQVDNILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISHNQGRLGKTLFSDQVNTE
EEKVKIHAAWDSEEEARAIGEEIERAQQADHSLNHIAILVRASFQMREFEDRFVTLGLNY
RVIGGPRFYERMEIRDAMAYLRVVVQPADDLAFERIINTPKRGLGDATLRILYESARTRA
IPLFFAAAEIIETDELKPKARSALRSVVENFRRWQNMLQNTPHRELAEIILDDSGYTSMW
LEDRSPEAPTRLENLKEMVRSMEQFESLPSFLEHVALVMDAENDENTDAVNIMTLHSAKG
LEFETVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGLTRAKKHLHIWFVSNRRIHG
FWQSTLPSRFLNELPEEHIEVVEMETSYGGYGKSRFKHHNPFYHEYSTSKQKRVQKNIEG
KVIARSISETPSDFSINDRIFHIKFGYGHISAIDGHKLTIVFEKAGEKRVLDNFVSKA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctgatcacataccattctttgaagatgactcccctccccataagcat
gaaaataactctgggttaaccaaccagaatgtaacagtaaaagaaaaaacacaatatagt
gctgattatttagaaaaactcaatcccgaacaacaacaggccgttatgaatacagaaggc
cctcttttagttcttgcaggtgctggtactggaaaaacgcgcgttctgacaacgcgtatt
tctcatattttgcactctgggcttgcttcacctcaacaaatactcgctgtaactttcacc
aacaaagcagcacgtgaaatgaaaatgcgtattggtgaacttattggtgaaattgttgaa
ggcatgccttggcttggaacttttcattctatcggtgcgaagattttacgccgccatgca
gaacttgtgaacttaaaaagtaactttacaattcttgatagtgatgatgttactcggctt
ttaaaacagcttattcaagctgaagggttggacgataagcgttggcccgcacgaaacctt
gccattatgattgattcttggaaaaatcaaggactttcaccagaacatatttcagaaagt
gatgcccattcctttggtaacggcatgggacgtgaactttaccacaattatcagcatcga
ttaaaaagcctcaatgcttgtgattttggtgatcttcttcttcattctatctctatcttc
caacataacccagacattcttcgcgattatcattctaaattccgctatattcttgtagat
gaatatcaagatacgaatacagcacaatatctttggctccgccttttggcacaacaaccc
aaggggcaacatattaacctttgttgtgttggtgatgatgaccaatccatttatggatgg
cgtggtgctcaagttgataacatattacgttttgaaaaagattttcctcctgcaaaaatt
attcgtttagaacgcaattatcgctcaacatcccatattctcaaaaccgcttctcatctg
atttctcataatcaaggaaggcttggaaaaactcttttttctgatcaagtaaataccgaa
gaagaaaaagtaaaaattcatgctgcctgggattcggaggaagaagctcgcgccatcgga
gaagaaattgaacgcgcacaacaagccgatcattcattaaatcatatagctatattggtg
cgcgcatcattccaaatgcgtgaatttgaagatcgctttgtaacacttggtctcaattac
cgtgtcattggtggtccacgcttttatgaacgaatggaaatacgtgatgcaatggcatat
ttgcgcgttgtggttcaaccagcagatgacttagcttttgaacgtattattaacacacca
aaacgcggtttaggagatgctactctgcgcattctttatgagagcgcaagaacacgcgct
attcctctcttttttgccgccgccgaaatcattgaaacggatgagttaaaacccaaagca
cgcagcgctttgcgaagcgttgttgaaaacttccgtcgctggcaaaatatgctccaaaac
acaccccatagagagcttgccgaaataattctggatgattcaggctacacaagtatgtgg
ctagaagatcgctcaccggaagcaccaacacgactagaaaatctcaaagaaatggttcgc
tctatggaacaattcgaaagcctccctagctttttagaacatgttgcactggttatggat
gctgaaaacgatgaaaataccgatgcagtcaacattatgacacttcattcagcaaaaggg
cttgaatttgaaaccgtctttcttcctggttgggaagaagggctctttcctcatcagcgt
tcattagatgaaggtggacgttcaggattagaagaagaacgacgattagcttatgtagga
ctaacaagagcaaaaaaacatttgcatatatggtttgtatccaatcgaagaattcatgga
ttttggcaatctacccttccttctcgttttcttaatgaattaccagaagaacatatagaa
gtcgtagaaatggaaacatcttatggtggttatgggaagtcgcgctttaaacatcataat
cccttttatcatgagtattcgacatcaaaacaaaagcgcgtacaaaaaaacattgaagga
aaagtcatcgctcgatcaatctctgaaactccatcagatttttccatcaatgatcgaatt
tttcacataaagttcggttatggtcatatctcagcaatagatggtcataaattaaccatt
gtatttgagaaagcaggagaaaaacgagtgctcgataattttgtaagcaaagcttag
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integrated database retrieval system
