Bartonella henselae BM1374165: BM1374165_01194
Help
Entry
BM1374165_01194 CDS
T03309
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bhs
Bartonella henselae BM1374165
Brite
KEGG Orthology (KO) [BR:
bhs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BM1374165_01194 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhs03021
]
BM1374165_01194 (rpoD)
Transcription machinery [BR:
bhs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BM1374165_01194 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF1835
DUF3130
SNAD2
Tachylectin
Motif
Other DBs
NCBI-ProteinID:
CDO47188
UniProt:
X5M884
LinkDB
All DBs
Position
complement(1343939..1345942)
Genome browser
AA seq
667 aa
AA seq
DB search
MATKVKQKDNTEVTTQASVDSPLLDFSDDAIKKMVKIAKKNGYVTMDELNAVLPPDEVTS
EQIEDTLAMFSEMGINVVDDEGEAENYEEEVRVEGGDLVEATSNALVTTAKRELTDRTDD
PVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWREELKEQRI
LLREIIDLEMTYAGPEAKQAPVIERSEVQKVKEEKSSSAMRDMENIARDIGVEEDDEEDD
DVNLSLAAMENELCPQVMETLDFIAETYVKLRKLQDQHVESSLAERKEGALSPSQRKKCI
QLKSELVQAVKSLSLNQNRIESLVEQLYDINKRLIHNEGKLKRIANNYGVGHEEFLKEYQ
GRELDADWINYIATLSGRGWKEFSKREAKEIKTLRSEIQNLAQETAISIGEFRRIVTQVQ
KGERESTIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELSSK
LSMPLEKVRKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDTTTR
VLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRK
LRSFLDS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacagaaagacaatacagaagtaacgacccaagcgagtgtggac
agtcctcttctcgatttttctgatgatgccatcaaaaaaatggttaaaatcgccaaaaaa
aatggttacgtgacaatggatgaactgaacgcagttcttcctcctgatgaggttacatct
gaacaaattgaagataccttggcgatgttctcggagatgggcattaatgtcgtggatgat
gagggtgaggctgagaattatgaagaagaggttagggtagaggggggggatttagtagaa
gctacgagcaatgcgcttgtaacgacagccaagcgtgagctaacagatcgcaccgatgat
ccagtgcgcatgtatttgcgtgagatgggggctgttgagctcctttcacgagaaggtgaa
attgccattgctaagcgtattgaagcaggacgtgaaacaatgattgcggggctttgtgag
agtcccttaacttttcaggctcttattatctggcgtgaagaattaaaagagcagcgtatt
ctcctgcgtgaaattattgatcttgaaatgacttatgcaggtccagaagctaagcaggct
cctgttattgaacgaagtgaggtccaaaaagtaaaagaggaaaagtcctcttctgccatg
cgtgatatggagaatattgcgcgagatataggtgtcgaagaggatgatgaagaagacgat
gatgttaatttatcgcttgctgcaatggaaaatgaactctgtcctcaggttatggaaact
ttggattttattgctgaaacctatgtgaaattgcgaaaattacaagatcagcatgttgaa
agtagtttggcagagcgtaaagagggagctctttcaccttcacagaggaaaaaatgtatt
caattgaagagcgaattggttcaggcagtgaaatctctttctttaaaccaaaatcgtatt
gagtcgttggttgagcagctttatgatatcaataagagattgattcataatgaaggtaag
ttgaagcggattgctaataattatggcgttggtcatgaggagtttttaaaagaataccaa
ggtcgtgaattagatgcagattggattaattatattgcaactttgtctggacgcggttgg
aaagagttttctaagcgtgaagcgaaagaaattaaaactttgcgcagcgaaatacaaaat
ttggcgcaagaaacagctatttcgattggcgaatttcgtcggattgtgacacaagtgcag
aaaggtgagcgcgaatcgacaattgcaaaaaaggaaatggtggaagctaatttgcgtctc
gtaatttcaattgcaaaaaaatatactaatcgtggtttgcagtttcttgatcttattcaa
gaaggcaatatcggtttgatgaaggcagtggataaatttgaatatcgtcgtggatataag
ttttcaacttatgcaacatggtggattcgtcaggcaattacacgctcaattgctgatcag
gcacgcactattcgtattcctgttcatatgattgaaacaattaacaaaattgttcgtaca
tcgcgtcagattttacacgaaatcgggcgtgaacctacgccagaagaattgtctagtaaa
ctttctatgcccttagagaaagtgcgaaaagttcttaaaattgcaaaggaaccgatttca
cttgaaacacccgttggtgatgaagatgattcccatttgggtgattttattgaagatagg
aacgcattattgccgatagatgccgctattcaagctaatctgcgcgatacgacaacgcgt
gtacttgcttcactaacaccacgtgaagaacgtgttttgcgaatgcgttttggtatagga
atgaacactgatcatacattggaggaagttggtcaacagttttcagttacacgcgagcgc
attcgtcagattgaagcaaaggcgcttcgtaagttaaagcatcctagtcgttcacgcaaa
ttgcgtagttttcttgattcttaa
DBGET
integrated database retrieval system
