KEGG   Bartonella henselae BM1374165: BM1374165_01726
Entry
BM1374165_01726   CDS       T03309                                 
Symbol
rho
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
bhs  Bartonella henselae BM1374165
Pathway
bhs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BM1374165_01726 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhs03021]
    BM1374165_01726 (rho)
   03019 Messenger RNA biogenesis [BR:bhs03019]
    BM1374165_01726 (rho)
Transcription machinery [BR:bhs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BM1374165_01726 (rho)
Messenger RNA biogenesis [BR:bhs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BM1374165_01726 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB NACHT S1CSD-TOTE-2
Other DBs
NCBI-ProteinID: CDO47697
UniProt: X5M0Y5
LinkDB
Position
complement(1973593..1974858)
AA seq 421 aa
MQEMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLALQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPAQIQSFSLKTGDTIEGPIRSPKEGERYFALLKIN
TINFENPEKIRYKIHFDNLTPLYSNERFQMEIQDPTEKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAI
RHVQVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEELLVARQDLHKIFVLRRILAPMNVTDAIEFLIDKLKQTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactacaagaacttaaaagtaaaaatcccgttgaacttgtttctttt
gctgaaacattagaagttgaaaatgcttctcttatgcgtaaacaagaattaatgtttgct
attttgaaaaaacttgctttgcaagatgtagaaattatcggagaaggagttgttgaagtt
ttacaagatggatttggatttttgcgatctgccgatgcaaattatcttcccgggcctgat
gatatttatctttcacctgcgcaaattcaatctttttctttaaaaacgggggatactatt
gaaggtcctatacggagtccaaaggaaggagagcgttattttgctcttctcaaaattaat
acaattaattttgaaaatcccgaaaaaattcgttataaaatacattttgataatctcacc
cctctttattcaaacgaacgtttccaaatggaaatacaagatcctactgagaaggatatg
tcatcacgggtgattgatttgatctctcccttgggaaaaggacagagaggtcttattgta
gcacctcctagaacaggaaaaactgttttacttcaaaatattgctcattctattaccact
aatcatcctgaatgttatcttattgtccttttaatcgatgaaaggccagaagaagtcact
gatatgcaacgttctgtaaaaggagaggtggtttcttctacttttgatgaaccagcaata
cgtcatgtacaagtagctgaaatggttattgaaaaagccaaacgtctcgttgaatatggg
cgtgatgtggttattcttcttgattctattacacgtttaggacgtgcttataatacagtc
gttccttcatcaggtaaggttttgacaggtggtgtagatgcaaatgctttgcagcgtcca
aaacgtttttttggggcagcacgtaatattgaagaaggtggatctttaactattattgca
acggctttgattgatacaggtagccgtatggatgaagttatttttgaagaatttaaagga
acgggtaattcggaaattgttcttgatcgtaaagttgctgataagcgtatttttcctgct
atggatattttaaagtcaggaacacgtaaggaagaacttttagtagcacgacaagattta
cataaaatttttgtacttcgtcgcattttagcacctatgaatgttacagatgcaattgaa
tttttgattgacaagttaaaacaaacaaaaaacaatagtgaattttttgattcaatgaat
acgtag

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