Bacillus halotolerans: DIC78_12445
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Entry
DIC78_12445 CDS
T06619
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bht
Bacillus halotolerans
Pathway
bht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DIC78_12445 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bht03021
]
DIC78_12445 (rho)
03019 Messenger RNA biogenesis [BR:
bht03019
]
DIC78_12445 (rho)
Transcription machinery [BR:
bht03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DIC78_12445 (rho)
Messenger RNA biogenesis [BR:
bht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DIC78_12445 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_22
AAA
NACHT
EZH2_WD-Binding
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AZV51472
UniProt:
A0A9Q6F3T0
LinkDB
All DBs
Position
2434374..2435657
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRHMVLETKPNFLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITANQPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWSIRKTMSDSPDFAEKFMRKMKKTKTNQEFFDILNQEWKQA
NLSSARR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatctatttcctctttggaaaatatgaaattgaaagagctatatgaactt
gcaagacattataaaatctcctactacagcaaactgacaaaaaaagagctgattttcgcc
attctgaaagcgaatgcagagcaggaagatcttctgtttatggaaggtgttcttgagatc
atccaatcagagggatttggcttcctgagaccgatcaactattctccaagctctgaagac
atttacatctcagcttcacaaatccgccgtttcgatttacggaacggagacaaagtatca
ggcaaggttcgcccgccaaaagaaaacgagcgctattatggacttttgcacgttgaagcg
gtaaatggagatgatccggaatcggcaaaagagcgtgttcacttcccagcccttactccg
ctttatccagaccgccatatggtgctcgagacaaaaccgaatttcttgtctacaagaatt
atggacatgatggcgccggtaggctttggccagcgcggtttgattgttgcgccgccgaaa
gccgggaaaacgatgctgctgaaggaaatcgccaacagcattacagcgaaccagcctgaa
gcagagctgattgtgctgttgatcgacgaaagaccggaagaggttacagacattgagcgt
tctgttgctggggatgtcgtcagctcaacgtttgatgaagtgccggaaaaccatatcaaa
gtagccgagcttgtgcttgaacgcgctatgcgcctcgttgaacataagaaagacgtcatt
atcctgatggacagtatcacacgtctggcccgcgcctacaacttagtgattccgccgagc
ggaagaacactttccggagggattgacccggcagcgttccaccgtccgaagcgtttcttc
ggggcggcgagaaatatcgaagagggcggaagcttaacgatcctcgccactgctcttgtt
gatacaggatcccgtatggatgatgtaatctatgaagaattcaaaggaacgggcaacatg
gagcttcatcttgaccgctctctggcagaacgccgcatcttccctgccatcgatattcgc
cgttctggaacgcgtaaggaagagctgcttgtgcctaaagagcatcttgaccgtttatgg
tctatccgcaaaacgatgtcagattcgcctgatttcgcggaaaaattcatgagaaaaatg
aaaaagaccaaaacaaaccaggaatttttcgatattctcaatcaagaatggaaacaggca
aatctatcatcagccagacgataa
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