Bacillus halotolerans: DIC78_17065
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Entry
DIC78_17065 CDS
T06619
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bht
Bacillus halotolerans
Pathway
bht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DIC78_17065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bht03400
]
DIC78_17065
Enzymes [BR:
bht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DIC78_17065
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DIC78_17065
DNA repair and recombination proteins [BR:
bht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DIC78_17065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AZV50569
UniProt:
A0A9Q4HT67
LinkDB
All DBs
Position
3321265..3322092
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRRTLTGLVRGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK
FLLFNLDHYVMVSHLRMEGKYGLHQEEEPDDKHVHVIFTMTDGTQLRYRDVRKFGTMHLF
KPGEEAGELPLSQLGPEPDAEEFTSAYLKARLAKTNRAVKTALLDQKTVVGLGNIYVDEA
LFRAGVHPETKANQLSDKKIKKLHAEIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHF
VYGKKDEPCKNCGTMITKIVVGGRGTHFCAKCQKK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccagaggttgaaaccgtccggcgcactctgaccgggcttgtaagagga
aaaacaatcaaatcggtagagatcagatggccgaatatcatcaaacggcctgccgaaccg
gaggaatttgcgcgaaacttagcaggagaaaccatccagtccatcggaagacggggaaag
tttttactgtttaacttggatcattatgtcatggtctcccaccttcgtatggaaggaaag
tacgggcttcaccaagaggaggagccggacgataaacacgtgcatgtcatatttacgatg
acggacggaacccagctgcgttacagggacgttcggaaattcggaaccatgcatttattt
aaaccgggagaggaagcaggagagctgccgctttctcagctcggacccgaaccggatgca
gaagaatttacgagtgcgtatttgaaagcacggctcgcgaaaacaaaccgagctgtcaaa
accgctcttctggatcagaaaacggtcgtcggactcgggaacatttatgtggacgaggct
ctgttcagagcgggcgtccatcccgagacaaaggcaaaccagctatcagataaaaaaatc
aaaaaacttcatgctgaaattaaaaatacccttcaggaagcgattgatgccggtggaagc
actgtccggtcgtatatcaattcccaaggagaaatcggaatgtttcagctgcagcatttt
gtgtacgggaaaaaagatgagccctgcaaaaattgcggcaccatgattaccaaaattgtc
gtcggaggcagaggcacacatttttgcgccaagtgccagaaaaaatag
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