Bacillus halotolerans: DIC78_19955
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Entry
DIC78_19955 CDS
T06619
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bht
Bacillus halotolerans
Pathway
bht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DIC78_19955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bht03019
]
DIC78_19955
03400 DNA repair and recombination proteins [BR:
bht03400
]
DIC78_19955
Enzymes [BR:
bht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DIC78_19955
Messenger RNA biogenesis [BR:
bht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DIC78_19955
DNA repair and recombination proteins [BR:
bht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DIC78_19955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SNF2-rel_dom
Cas3-like_C_2
DUF6119
Motif
Other DBs
NCBI-ProteinID:
AZV51099
LinkDB
All DBs
Position
3848191..3849681
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AA seq
496 aa
AA seq
DB search
MTKLQQALYQFFGFHSFKKGQEDIIRSVLSGKDTIAMLPTGGGKSLCYQLPGYMLDGMIL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLGRQERHFVLEHIHRYKFLYLSPEALQSSY
VLEKLKSVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKDTLH
DVMNLLDLQHAEQHLNSVNRPNIALKVENTADTAEKIDRVIQLVENLQGPGIVYCPTRKW
AEELAEEIKYKTSSRVDYYHGGMDSGDRMLIQQQFINNQLDVICCTNAFGMGVDKSDIKY
VIHFYLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESLADGEIANVIR
VLEETEEQDERKLRELFMQYGITETQSRMIIHLFMQGKTSIDLIKREITYRMELKLEKMR
HVAALLHRDGCLRQSLLAYFDETYEPDKGSMPCCSHCGFDLSLYEQKEERVQKAPLDGWR
SELHRIFSLETVGEPN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaagcgttatatcagttttttggttttcattcctttaaaaaaggg
caggaggacatcatcagaagtgtactcagcggaaaggataccattgcaatgcttccgaca
gggggaggaaagtctctttgctaccagttgcccggttatatgcttgacggtatgatatta
atcgtttctcctttgctttctttaatggaggaccaggtgcagcagctgaaagcgcgggga
gaaaaacgagctgccgcattgaatagcatgctcggcaggcaggaaagacatttcgttttg
gagcatatccaccgctacaaatttttgtatctgtcgcccgaagcattgcagtcgtcatat
gtcctggaaaaattaaagagcgttccgatcagtctttttgttattgatgaagcgcattgt
atatcggaatggggacatgattttagacctgattattcaaagcttggacagctgagaaaa
aaactagggcatccgccggtgcttgctctgacggctacggcgacgaaggatacgctgcat
gatgtcatgaatttgcttgatctgcagcatgccgaacagcatcttaactcagttaaccgg
ccgaatattgcgctcaaagttgaaaataccgcggatactgccgaaaaaatagatagggtc
attcagctggttgaaaacctgcaaggaccgggaattgtctattgtccgacaaggaaatgg
gcagaggaattagcggaggaaattaaatataaaacaagcagcagggttgattattaccat
ggcggcatggattctggtgacagaatgttaattcagcagcaatttatcaataatcagctt
gatgtcatttgctgtacaaatgcgttcggcatgggtgttgataaatctgatatcaaatat
gtcatccatttttatctcccgcagacggctgaagcttttatgcaggaaatcggcagagca
gggcgtgacggaaaaccgagtgtcagcattttgctcagagcgcctggagatttcgaattg
caggagcagattatccaaatggagagccttgcggatggagaaatcgccaatgttattcgc
gtgctggaagaaacggaagaacaggacgaaagaaaactgcgcgaattattcatgcaatat
ggtatcacagagacgcagtcgcgcatgatcatccatctctttatgcaggggaaaacatca
attgatctgatcaagcgggaaatcacgtatcgcatggagctgaaacttgaaaaaatgcgt
cacgtggcagctttacttcatcgcgatggctgtttaagacaatcgctgttagcctatttt
gatgaaacatacgagcccgataaaggaagcatgccatgctgttcacattgcggttttgat
ctttcgctgtatgaacaaaaagaggagcgcgtccaaaaagcgccattagacggctggaga
tcggaattgcaccgtatattcagtctagagactgtaggtgagccgaactga
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