Butyrivibrio hungatei: bhn_I0605
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Entry
bhn_I0605 CDS
T04542
Name
(GenBank) DNA-directed RNA polymerase beta' subunit RpoC
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bhu
Butyrivibrio hungatei
Pathway
bhu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bhn_I0605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhu03021
]
bhn_I0605
03400 DNA repair and recombination proteins [BR:
bhu03400
]
bhn_I0605
Enzymes [BR:
bhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bhn_I0605
Transcription machinery [BR:
bhu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bhn_I0605
DNA repair and recombination proteins [BR:
bhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bhn_I0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AOZ95639
UniProt:
A0A1D9NZJ0
LinkDB
All DBs
Position
I:682872..686609
Genome browser
AA seq
1245 aa
AA seq
DB search
MSDSTMNKAINEASSGRSSTQQQTYQPMTFDSIKIGLASPEKIKSWAIRDKNDPESGKVT
KPETINYRTLKPERDGLFCERIFGPTKDWECHCGKYKKIRYKGVVCDRCGVEITKSSVRR
ERMGYIELAAPVSHIWYFKGIPSRMGLILDLSPRVLEKVLYFASYIVLDPGETSLEYKQV
LSEKEYQDAREEWGGKFRAGMGAESIKELLQAIDLEAEYQELKEGLDTSSGQKRARIIKR
LEVVEAFRESGNNPAWMIMDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLK
RLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQ
NLLGKRVDYSGRSVIVVGPELKIYQCGLPKEMAIELFKPFVMKELVSRGISQNIKNAKKL
VERLDEQVWDVLEDVIKEHPVMLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTPFNAD
FDGDQMAVHLPLSVEAQAECRFLMLAPNNLLKPSDGGPVNVPTQDMVLGIYYLTQERPGA
LGEGKFFKSVDEAILAYENGYCTLQTRIKIRMDRTKADGTVGTGIVESTLGRFLFNEIIP
QDLGFVDRTVPENEFKLEVDFMVGKKQLKQIVTAMINTHGTFATAEVLDKIKATGYHYST
RAAMTVSIADMTVPKQKQEMLDEAQATVDRIAMNFRRGLITDEERYRAVVDTWMETDKKL
TDELLAGLDKYNNIYMMADSGARGSNQQIKQLAGMRGLMADTTGRTIELPIKSNFREGLD
VLEYFMSAHGARKGLSDTALRTADSGYLTRRMVDVSQELIIRDIDCCADKEVIPGMTVKA
FMDGKETIEPLKDRITGRYSCETIKDKDGNVIVKKNHMITPSRAAKILSVGVNAKGQPVE
AVKIRTILTCRSHNGICAKCYGANMATGEAVQVGEAVGIIAAQSIGEPGTQLTMRTFHTG
GVAGGDITQGLPRVEELFEARKPKGLAIISELDGQVEIRDTKKKREVIVTNDETGESKAY
LIPYGSRIKVQDGMTIEAGDELTEGSVNPHDLLKIKGIRAVQDYLLREVQRVYRLQGVDI
CDKHIEVIVRQMLKKVRIDESGDTEFLPGTLVDVLDFEDSNEALISEGKRPAEGKQVILG
ITKAALATNSFLSAASFQETTKVLTDAAIKGKVDPLIGLKENVIIGKLIPAGTGMKRYRN
TALNTDANFKDPEKLILKKKKKDFDDEFEDAIDIEDDEVSISEEE
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcaactatgaataaagcaataaatgaagcttcaagcggaagaagtagtaca
cagcagcagacctatcagcctatgacctttgactcaatcaagattggacttgcatcacca
gaaaagatcaaaagctgggcaattagagacaagaacgacccggaaagcggcaaggtaaca
aagccagagacaatcaactacagaacattgaagccagaaagagatggtcttttctgtgaa
agaatatttggaccaactaaagactgggaatgtcactgtggtaagtacaagaagatcaga
tataagggcgttgtctgtgatcgttgtggcgtagaaattacaaagagcagcgtacgtcgt
gagagaatgggatacatcgagcttgcagctcctgtttctcatatctggtacttcaaggga
atccctagcagaatgggtcttatccttgatctttctccacgtgtacttgagaaagttctt
tactttgcttcatatatagtacttgatccaggtgagacatcacttgagtacaagcaggtt
ctctctgagaaagagtaccaggatgccagagaagagtggggcggaaagttccgagctggt
atgggcgctgagtccatcaaagagcttcttcaggcaattgatcttgaagctgaatatcag
gaactcaaagagggtcttgatacatcaagcggacagaagagagctagaattattaagcgt
ctcgaagtagtcgaagcatttagagagtctggaaataatcctgcatggatgatcatggat
tgcatcccagtaatcccaccagatcttcgtcctatggtacagcttgacggtggacgtttc
gctacatcagatcttaacgatctttacagaagaattatcaatagaaataacagacttaag
agacttctcgatctcggtgcacctgatatcatcgttcgcaacgagaagagaatgcttcag
gaggctgtagatgccctcatcgataacggtagaaggggaagacctgtaacaggacctggt
aacagagcactcaagtcactttctgacatgctcaaaggtaaatcaggacgtttccgtcag
aaccttcttggtaagcgtgttgactattcaggacgttcagttatcgtagtaggaccagaa
cttaagatttatcagtgtggacttcctaaggaaatggctatcgagcttttcaaacctttc
gttatgaaagaacttgtttctagaggaatttcacagaacataaagaacgctaaaaagctc
gttgagagacttgatgagcaggtttgggacgttcttgaggatgtaattaaggagcaccca
gttatgctgaaccgtgcccccacacttcacagacttggtattcaggcatttgagccaatt
cttgtagaaggtaaggctatcaagcttcatcctcttgtatgtacaccttttaacgccgac
ttcgatggtgaccagatggctgttcaccttccattgtcagtagaggcacaggctgagtgt
agattcctcatgcttgcacctaataaccttcttaagccttcagatggtggtccagtaaac
gttcctacacaggatatggtacttggtatctactatttgacacaggagagacctggtgct
cttggcgaaggtaagttctttaagagtgttgacgaagctattcttgcttatgagaatggt
tactgcacacttcagacaagaattaagattagaatggacagaactaaggctgatggaaca
gttggaactggaatcgtagagtcaactcttggtagattcctcttcaatgagatcattcct
caggaccttggatttgttgatagaacagttccagaaaacgagttcaaacttgaagttgac
ttcatggttggtaagaagcagctcaagcagattgttacagctatgatcaatactcacgga
acatttgctacagcagaggttcttgataagatcaaagctactggttatcactattcaaca
cgcgctgctatgacagtatctatcgcagatatgacagtgccaaagcagaagcaggaaatg
cttgatgaagcacaggctacagttgatagaatcgctatgaacttccgtcgtggtcttatc
acagacgaagagcgttaccgtgcagtagttgatacttggatggagacagataaaaagctt
actgatgagcttcttgctggtcttgataagtacaacaacatctacatgatggctgactct
ggtgcccgtggtagtaaccagcagatcaaacagctcgcaggtatgcgtggacttatggct
gatacaacaggtcgtacaatcgaacttcctatcaagtcaaacttccgtgaaggtcttgac
gttttggaatactttatgtcagctcacggtgctcgtaagggtctgtcagatacagctctt
cgtacagccgattcaggataccttacacgtcgaatggttgacgtatcacaggaactcatt
atccgtgacatcgactgctgcgcagacaaggaagtaattccaggaatgactgtaaaggca
ttcatggatggtaaagaaacaatcgagccattaaaggatagaatcacaggaagatattct
tgcgagactattaaagataaagatggtaacgtgatcgttaagaagaatcacatgatcaca
ccatcaagagcagctaagatcctttcagtaggcgtaaatgctaagggtcagccagttgaa
gctgttaagatccgtacaattcttacatgccgttcacacaacggaatctgtgctaagtgc
tacggtgcaaacatggcaactggtgaggctgtacaggttggtgaggcagttggtattatt
gctgctcagtcaatcggtgagcctggtacacagcttacaatgagaacattccatactggt
ggtgttgccggtggcgatattactcagggtcttcctagagtagaagagcttttcgaggca
agaaagccaaagggacttgctattatttcagagcttgatggacaggttgagatcagagat
accaagaagaagcgtgaagttattgtaactaacgatgagactggtgaatcaaaggcttac
ctcattccttatggatcacgtatcaaggttcaggatggaatgacaattgaagctggtgat
gaacttactgaaggttcagttaacccacacgatcttcttaagattaagggtatccgtgca
gtacaggattatctcttaagagaagttcagagagtatatcgtttacagggtgttgatatc
tgcgataagcatatcgaagttattgttcgtcagatgcttaagaaggtaagaatcgacgag
agtggagatacagaattcctcccaggaacacttgtagatgtacttgattttgaagatagt
aacgaagcacttatcagtgaaggtaagagacctgcagagggtaagcaggtaatactcggt
attacaaaggctgctcttgcaactaactcattcctttcagctgcatcattccaggagaca
actaaggttcttactgatgctgctatcaagggtaaggttgatccacttatcggacttaag
gaaaacgttattatcggtaagctgatccctgctggtacaggtatgaagagatatagaaat
acagctcttaatactgacgcaaacttcaaggatccagagaaacttatccttaagaaaaag
aagaaagactttgatgatgagtttgaagatgcaatcgacattgaagatgatgaagtttca
atctcagaagaggagtaa
DBGET
integrated database retrieval system
