Bradyrhizobium huanghuaihaiense: N2603_21120
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Entry
N2603_21120 CDS
T11818
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhua Bradyrhizobium huanghuaihaiense
Pathway
bhua03030
DNA replication
bhua03430
Mismatch repair
bhua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N2603_21120 (dnaE)
03430 Mismatch repair
N2603_21120 (dnaE)
03440 Homologous recombination
N2603_21120 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhua03032
]
N2603_21120 (dnaE)
03400 DNA repair and recombination proteins [BR:
bhua03400
]
N2603_21120 (dnaE)
Enzymes [BR:
bhua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N2603_21120 (dnaE)
DNA replication proteins [BR:
bhua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N2603_21120 (dnaE)
DNA repair and recombination proteins [BR:
bhua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N2603_21120 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
UWU80873
LinkDB
All DBs
Position
4418953..4422456
Genome browser
AA seq
1167 aa
AA seq
DB search
MPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPALALTDTDNLFGALEFSDKMAGS
GIQPIVGCELAIDFGDQDPNARNAMGPSRVVLLAAQERGYRSLMRLNSRAFLESPDSHAP
FIKFDWFNGETEGLIALTGGPDGPISLALAGGMAELAAARCERLANLFGDRLYIELQRHN
IDKERRVESGLIDIAYAKGLPLVATNEPYFAATDDYEAHDALLCIAGGRLIAETDRVQLT
PDHRFKTRAEMAVLFADIPEALASTVEIAERCSYRPMTRKPILPFFTVGAAASSDAAAVE
AAELKRQAEEGLANRLRVHGLSQGTTEEDYNKRLAFELDVIMRMKYAGYFLIVSDFIKWA
KAHGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQDRR
GEVIKYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAAPV
TLAAAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPMY
RDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVACKLLKPRDIHVDLATLPIDDA
ESYQMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCARKH
GDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAEMD
KQRDIFVAGAVKNGVPKAQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYPVE
FIAASMTLDLNNTDKLSEFRSEAQRLGIKVEPPNINRSGATFEVGDKVIYYALAALKGVG
IQAIEQIIEERTKRGVFTSLADFAARVNPRAINKRIIESLAAAGAFDTLEPNRARVFAGA
DSIMAACQRAHQAETIGQNDMFGMSADAPTIMLPQIEPWLPAERLRREYDAIGFFLSGHP
LDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPTG
HFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDDAAAKTQKGLRI
FLRDTKPLDSIAKRLAGPDAAASNGAAPKIGSPGIAPRSNGDGEVSLVLMLDLETEVEMK
LPGRFKVSPQIAGAIKAVAGVVDVQQL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccggatttgtccaccttcacgttcactcggcctattcgctgctcaagggc
tcgatcaagatcgccaagctggccgagcttgcgaagaaagaccaccagcccgcgttggcg
ctgaccgacaccgacaatctgttcggggcgctggagttctccgacaagatggcgggctcc
gggatccagccgatcgtcggctgcgagcttgcgatcgacttcggcgatcaggatcccaac
gcgcgcaatgcgatgggaccctcgcgcgtcgtgctgctggccgcgcaggagcgcggctat
cgcagcctgatgcggctcaattcgcgggcgttcctggaatcacccgacagccatgccccg
ttcatcaagttcgactggttcaatggcgagaccgagggcctgatcgcgctcacgggcggt
ccggacgggccgatctcgctggcgcttgccggcggcatggccgagctcgcagcggcgcgc
tgcgagcgtctggccaatctgttcggcgaccggctctacatcgagctgcagcgccacaac
atcgacaaggagcggcgcgtcgaaagcggtttgatcgacatcgcctatgcgaagggcctg
ccgctggttgcgaccaacgagccgtatttcgccgcgaccgacgattacgaggcgcatgat
gcgctgctttgcatcgccggcggccggctgatcgccgagaccgatcgcgtgcagctcaca
cccgatcaccgcttcaagacccgcgccgagatggcggtgctgttcgcggacattccggag
gcgctggcctcgactgtcgagatcgccgagcgctgctcgtaccgcccgatgacgcgcaag
ccgatcctgccgttcttcaccgtcggcgccgcggcgagctcggatgccgccgcggtcgag
gcggccgagttgaagcggcaggcggaggaggggctcgccaaccgtctgcgcgtgcacggc
ctgtcgcagggcacgacggaggaggactacaacaagcgcctggcgttcgagctcgacgtc
atcatgcgcatgaagtacgcgggctacttcctgatcgtgtccgacttcatcaaatgggcc
aaggcgcacggcattccggtcggaccgggccgtggctccggtgcaggctcgctggtcgcg
tgggcgctgaccatcaccgacctcgacccgatcaagttcggcctgctgttcgagcgcttc
ctcaatccggagcgcgtctcgatgccggacttcgacatcgacttctgccaggatcgccgc
ggcgaggtgatcaagtacgtccaggagcgctacggccgcgaccaggtcgcgcagatcatc
accttcggtacgctgcaggcgcgcggcgtgctgcgcgacgtcggccgcgtgctgcagatg
ccctatggccaggtcgacaagctgaccaagctggtgccgcagaatccggcggcgccggtg
acgctggcggctgcgatcgagagcgagccgaagctgcaggcgttccgcgatgaagatccg
gtggtggcgcgtgccttcgacatcgcgcagcgcctcgaaggcctgacccgccacgcctcg
acccacgcggccggcatcgtgatcggcgatcgccccttgagcgaactcgtgccgatgtac
cgcgatccgaaatcggacatgccggtgacccagttcaacatgaagtgggtcgagccggcg
ggcctcgtcaaattcgacttcctcggcctgaagacgctgaccgtgctcgacgtcgcctgc
aagctgctcaagccgcgcgatatccatgtcgatctcgccacactgccgatcgacgatgcc
gagagctaccagatgctggcgcgcggcgaggtggtcggcgtgttccaggttgaaagccag
ggcatgcggcgcgcgctggtcgacatgcgccccgaccgtttcgaggacatcatcgcgctg
gtcgcgctctatcgcccgggcccgatggcgaacatcccgacctattgcgcacgcaagcac
ggcgacgaggagccggagtatctccatccggtgctcgagccgattctgaaggagaccttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatgtcgggctattcg
ctcggcgacgccgacctcttgcgccgcgccatgggcaagaagatccgcgccgagatggac
aagcagcgcgacatcttcgtcgcgggcgcggtgaagaacggcgtgccgaaggcgcaggcc
gagaccatcttcgaattgctggcaaaattcgccgactacggcttcaacaagagccacgcg
gcggcttatgcgctggtgtcctaccacaccgcctatatgaaggcgcattatccggtggag
ttcatcgcggcgtcgatgacgctcgatctcaacaacacggacaagctctccgaattccgc
tcggaggcgcagcgccttggcatcaaggtcgagccgccgaacatcaaccgctccggtgcg
accttcgaggtcggtgacaaggtcatctactacgcgcttgccgcgctcaagggcgtcggc
atccaggcgattgagcagatcatcgaggagcgcacgaagcggggggtgttcacctcgctc
gctgacttcgccgcgcgcgtcaatccgcgtgcgatcaacaagcgcatcatcgaaagcctg
gctgccgccggcgccttcgacaccctggagccgaatagggcgcgggtcttcgccggggcg
gactcgatcatggccgcctgccagcgcgcgcatcaggccgagacgatcggccagaacgac
atgttcggcatgtcggcggacgcgccgaccatcatgctgccgcagatcgagccgtggctg
ccggccgagcggctgcgccgcgaatacgacgcgatcggcttcttcctgtcgggacatccg
ctcgacgattacgccaccgtcctgaagcggctgcgcgtgcagagctgggccgagttctcg
cgcgcggtgaagaccggcgccaccgccggcaaggtcgcggcgaccgttgtctcgcgcatg
gagcggcgtaccaagaccggcaacaagatgggcatcatgggcctgtcggacccgaccggg
catttcgaggcggtgctgttctccgaaggcctcgcgcaatatcgcgacgtgctggagccg
ggcgccgccgtgctgcttcagttaggtgccgagcttcagggcgaagacgtgcgtgcccgc
gtgctgcatgccgagccgctcgatgatgccgcggccaagacgcagaagggcctgcgcatc
ttcctgcgcgacaccaagccgctggactcgatcgccaagcgtctcgccggtcccgatgca
gccgcgtcgaacggtgccgcgccgaagatcggcagtcccgggattgcgccgcgctcaaat
ggcgacggcgaggtctcgctggtgttgatgctcgacctcgagaccgaggtggagatgaag
ctgcccggccgcttcaaggtctcgccgcagatcgccggcgcgatcaaggcggttgcgggc
gtggtggacgtgcagcaactgtag
DBGET
integrated database retrieval system
