Bisgaardia hudsonensis: A6A11_00225
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Entry
A6A11_00225 CDS
T06663
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhud
Bisgaardia hudsonensis
Pathway
bhud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6A11_00225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhud03019
]
A6A11_00225
03400 DNA repair and recombination proteins [BR:
bhud03400
]
A6A11_00225
Enzymes [BR:
bhud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6A11_00225
Messenger RNA biogenesis [BR:
bhud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6A11_00225
DNA repair and recombination proteins [BR:
bhud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6A11_00225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
QLB12147
LinkDB
All DBs
Position
complement(45430..47319)
Genome browser
AA seq
629 aa
AA seq
DB search
MPNQDNKKSAVNFSENSSQNNTALNILHSVFGYQSFRKGQEDIINATLAKKDSLVIMATG
NGKSLCYQIPALYFSGLTLVISPLISLMKDQVDQLVTNGIEADYLNSTQTFEEQQIIQNK
ATSGKLKLLYISPEKSMTTSFFHFINHCQLSFIAIDEAHCISQWGHDFRPEYSQLGGLKS
CFPNVPIMALTATADETTRKDILRNLQLIDPYIHIGSFDRPNIRYTLVEKFKPTEQLCKY
VLSQKGKSGIVYCNSRNKVERLAESLRNKGIMAEAYHAGMESNQREQVQRAFQRDNIQVV
VATVAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAILFYDPADYAWLQK
ILLEKQETQQRQIEQHKLQAIGEFAESQTCRRLVLLNYFGENKHQPCNNCDICLDPPKSY
DGLIDAQKVMSTIYRVGQSFGVHYIIAVLRGMQNQKIKDNHHDTLSVFGIGKDRNNEYWQ
SVIRQLVHQGFIRQVIDDFSSKLQLTENARPILRGEQTLKLAMPRISAITNITATSKSAI
INYDKDLFARLKFLRKQIADKENIPPYIVFNDATLQEMAQYKPTTAREMLEINGIGAIKL
ERFAQPFMLLIKEHQAMLNKENMPLKLSG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcaagacaataaaaaaagtgcggttaatttttctgaaaattcttcacaaaat
aataccgcacttaatatattgcattccgtatttggttatcaatcctttagaaaaggacaa
gaagatatcatcaatgctaccctagctaaaaaggatagtctagttattatggcaacaggt
aatggaaaatccctttgctatcaaattcctgccctttatttttctggattaacccttgtt
atctccccattaatttctttaatgaaagatcaagtggatcaattagtaacaaatggtatc
gaagctgattatcttaattcaacgcaaacatttgaagaacaacaaataattcaaaataaa
gcgacatcaggaaaattaaaattactttatatctctcctgaaaaatcaatgacaacgagt
ttttttcattttattaatcattgccaattaagttttattgctattgatgaagcgcattgt
atttcccaatggggacatgattttagaccagaatattcacaactaggcggtttaaaaagt
tgttttcccaatgtaccgattatggcactaacagcaacagcagacgaaacaacaagaaaa
gatattcttcgtaatctacaacttatcgatccctatattcatattggcagttttgatcgc
ccaaatattcgttatactttagtagaaaaatttaaacccactgaacaactttgtaaatat
gtactatcacaaaaaggaaaaagtggcattgtttattgtaatagtcgcaataaagtagaa
cgacttgcagagagtttacgcaataaaggcataatggctgaagcttatcacgcaggaatg
gaaagtaatcaacgtgaacaagttcaaagggcatttcaacgagataatatccaagtagtt
gtcgccacagttgcttttggtatgggaataaataagtcaaatgtacgttttgttgctcat
tttgatttacctcgtagtatagaatcctattaccaagaaacaggacgggctggaagagat
gatttgcccgcagaagctattttattttatgatcctgcagattatgcttggttacaaaaa
atactactcgaaaaacaagaaacacaacagagacaaatagaacaacataaactacaagcg
attggtgaatttgcagaaagccaaacttgtcgccgtttagtattactaaattatttcggt
gaaaataaacatcaaccttgtaataactgtgatatatgccttgatccaccaaaaagctat
gacggtctaattgatgcacaaaaagtaatgtcaaccatttatcgagtaggtcaatctttt
ggggtgcattatattattgcggtattgagaggaatgcaaaaccaaaaaataaaggataat
catcatgatacattaagcgtttttggcatagggaaagatcgcaacaatgaatattggcaa
tctgttattcgtcaattagtacatcaaggttttattcgacaagttattgatgattttagt
tcaaaattacaattgaccgaaaatgctagaccaattttacgtggtgagcaaactttaaaa
ttagctatgccaagaatttcagctattactaatataactgcaactagcaaatcagctatt
atcaattatgataaagatctatttgctagactaaaatttttacgtaaacaaattgccgat
aaagaaaatatcccaccttatatagtcttcaatgatgcgacattacaagaaatggcacaa
tataaaccaactacagcaagagaaatgttagaaataaatggtataggggcaataaaatta
gaacgcttcgcacaaccatttatgttattaattaaagaacatcaagcaatgctcaataaa
gaaaatatgccattaaaattgtcaggataa
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