Bisgaardia hudsonensis: A6A11_02390
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Entry
A6A11_02390 CDS
T06663
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bhud
Bisgaardia hudsonensis
Brite
KEGG Orthology (KO) [BR:
bhud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhud03032
]
A6A11_02390
03036 Chromosome and associated proteins [BR:
bhud03036
]
A6A11_02390
03400 DNA repair and recombination proteins [BR:
bhud03400
]
A6A11_02390
DNA replication proteins [BR:
bhud03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A6A11_02390
Chromosome and associated proteins [BR:
bhud03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
A6A11_02390
DNA repair and recombination proteins [BR:
bhud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
A6A11_02390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
XLF
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QLB12530
LinkDB
All DBs
Position
491203..491487
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAIKNPNISAKDVENIVKEILEHMSSTLEDGNRIEVRGFGSFSLHYRQPRV
GRNPKTGEKVKLDFKSVPHFKAGKELKERIDVKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaacttattgaaagattagcaattaaaaatccaaatatttcagctaaa
gatgtagaaaatattgtaaaagagatattagaacatatgtctagtactttggaagatggc
aatcgtattgaggttcgtggatttggcagtttctctcttcattatcgccagcctagagta
gggagaaatcctaaaacaggtgagaaagtgaaattagattttaaatctgtgcctcacttt
aaagcaggtaaagaattaaaagagcgtattgatgttaaatcataa
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