Bisgaardia hudsonensis: A6A11_04545
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Entry
A6A11_04545 CDS
T06663
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bhud
Bisgaardia hudsonensis
Pathway
bhud03420
Nucleotide excision repair
bhud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6A11_04545
03430 Mismatch repair
A6A11_04545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhud03400
]
A6A11_04545
Enzymes [BR:
bhud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6A11_04545
DNA repair and recombination proteins [BR:
bhud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6A11_04545
MMR (mismatch excision repair)
Other MMR factors
A6A11_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
QLB12926
LinkDB
All DBs
Position
967270..969456
Genome browser
AA seq
728 aa
AA seq
DB search
MDISELLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLISVENISEGNIIAV
TFTNKAAKEMRHRIESTLSQYSEHHLFGMWVGTFHSIAHRLLRSHYNDANLPQDFQIIDS
EDQLRLVKRLMKLHNYDEKIYPFKQACWYINNKKEEGLRAHQIDDHNDRQEKEWIKIYQI
YQDACDRSGLVDFSELLLRAYELWLKKPLILQRYQQRFQHILVDEFQDTNKIQYAWIKLL
AGDTGNVMIVGDDDQSIYGWRGAQVGNIQRFLEDFHQAKTIRLEQNYRSSANILQSANEL
IANNTDRLGKDLWTAGDKGDPVGIYAAFNEIDEAQFVASQINTWLDDGGRLDDCAILYRS
NSQSRVIEEALIRSKIPYRIYGGMRFFERQEIKDALAYLRLVANSQDDAAFERVVNTPPR
GIGDRTLDILRNLTREREITLWQAVQVAHNENMLPNRASTSLLRFVELINSLRQETEEMP
LFAQADFTIKHSGLYDMYKQEKGDKGEVRIENLEELVNAAKEFIKPDDAEDMTDLTAFLT
HASLESGEAQASAHQSSVQMMTLHSAKGLEFPRVFIVGVEEGIFPSGRSFEEPGRLEEER
RLAYVGITRAKHKLTLCYAESRRLYGKEEKHLPSRFIAELPEDCIQEIRLRGTVTRAYNK
SAVGSLLKNNSFSESGWKIGQKVTHHKFGQGTIINVEGSDNNTRLQIAFQGQGIKWLIAH
LAKLEKIA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagaattacttgatggcttaaatgataaacaaagggaagccgtggcggca
ccattaggcaattatttagttttagcaggggcggggagtggtaaaacgagggtattaacc
cacagaattgcttggttgatttctgttgagaatatttcagaaggaaatattatagcagtt
acctttaccaataaagccgcaaaagaaatgcgtcatcgtatagaatcaaccctttcacaa
tattctgagcatcatttatttggtatgtgggttgggacttttcatagtattgctcatcgt
ctgttacgttcccattataatgatgcaaacctaccacaagatttccaaattattgattca
gaagatcagctacgcttagtaaagcgattaatgaaattacataattatgatgaaaaaatt
tatccttttaaacaagcctgctggtatatcaataataaaaaagaagaagggttaagagca
catcaaattgatgatcataatgatcgtcaagagaaagaatggataaaaatttatcaaatt
tatcaagatgcttgtgatcgctcaggattagttgatttctcggagctattacttagagct
tacgaattatggttaaaaaaaccgttaattttgcaacgctatcaacaacgttttcagcat
atccttgttgatgagtttcaagataccaataaaattcaatatgcttggattaagttattg
gcaggggatactggaaatgtgatgatcgttggtgatgatgatcaatctatttatggctgg
cgtggtgcacaagtaggaaatattcaacgttttttagaggattttcatcaagcaaaaacg
attcgattggaacaaaattatcgttctagtgccaatattttacaaagtgctaatgaatta
attgctaataacaccgatcgtttggggaaagatctttggacggctggagataaaggtgat
cctgttggtatttatgctgcatttaatgaaattgatgaagcacagtttgtggcgagtcag
ataaatacttggctagatgatggggggcgactagatgattgtgctattttatatcgtagt
aatagtcaatctcgagttattgaagaagcgttgattcgttctaaaattccttatcgtatc
tatggtggaatgcgtttctttgaacgtcaggaaattaaagatgcactggcttatttgcgt
ttagtagcaaattctcaagatgatgctgcatttgagcgtgttgtgaatacaccaccaaga
ggaattggtgatcgtacacttgatattttgagaaacttaacccgagaaagagaaattact
ttatggcaagctgtgcaagtagcacataatgaaaatatgctaccaaatcgagcctcaaca
tctttgctacgttttgttgagctaattaattcattacgccaagaaacagaagagatgcct
ttatttgctcaagctgattttacgataaaacattctggtttatatgatatgtataagcaa
gaaaaaggtgataaaggtgaagtgcgtattgaaaatctagaagaattagtgaatgctgca
aaagaatttattaaaccagatgatgcggaggatatgactgatcttacagcctttttaact
cacgcttctcttgagtcgggcgaggcacaagcttcagctcatcaatcttctgtacagatg
atgacgttacactcagcaaaaggtcttgaatttccaagagtatttattgttggggtagaa
gaaggtattttcccaagtggtcgttcttttgaagaaccgggaaggcttgaagaagaacgt
cgtttagcttatgtaggaattacaagggctaagcataaattaacgctttgttatgctgaa
tcacgccgattgtatggcaaggaggaaaaacatttaccttctcgatttattgctgaatta
ccagaagattgtattcaagaaattcgtttacggggaacggtaacaagagcttataataaa
agtgcagttggatctttgttaaaaaataatagtttttctgagagtggttggaaaattggg
caaaaagttacccatcataaatttgggcaaggtacaatcattaatgttgaaggaagtgat
aataacaccagattacaaattgcttttcaaggacaaggtatcaagtggttaattgctcat
ttggcaaaattagagaaaatagcataa
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