Bisgaardia hudsonensis: A6A11_05810
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Entry
A6A11_05810 CDS
T06663
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhud
Bisgaardia hudsonensis
Brite
KEGG Orthology (KO) [BR:
bhud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhud03032
]
A6A11_05810
03400 DNA repair and recombination proteins [BR:
bhud03400
]
A6A11_05810
Enzymes [BR:
bhud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A6A11_05810
DNA replication proteins [BR:
bhud03032
]
Prokaryotic type
DNA Topoisomerases
A6A11_05810
DNA repair and recombination proteins [BR:
bhud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A6A11_05810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_TFIIB
Zn_ribbon_recom
Toprim_4
Toprim_2
DUF2399
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
QLB13161
LinkDB
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Position
complement(1265864..1268476)
Genome browser
AA seq
870 aa
AA seq
DB search
MTKSLVIVESPAKAKTINKYLGSNYIVKSSVGHIRDLPTSGSSTGEKAKPVSTKGLTAEE
KKKIKAEKDRVALVKRMGIDPYHSWKANYQILPGKEKVVSELKSLAKKADHIYLATDLDR
EGEAIAWHLKEVIGGEDSRFSRVVFNEITKNAITQAFEKPEHLNLDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREHDIKSFKPEEYWEVSVVTQNTKKQKI
ELEVTDFNGKKFLPKNEEQAQSAVQFLENSHYVVSNVETKPTSSRAKPPFITSTLQQTAS
TRLNFGVKKTMMLAQRLYEAGYITYMRTDSMNLSQDALSMVRDYIGKNYGQPYLPEKPNF
YASKQNAQEAHEAIRPSDVLVKSSDLVGMDKDAVRLYDLIWCQFVACQMPAAQYDSTTLT
VAAGDYVLKTRGRILRFDGWTKVLGLSGKSGEDQVLPEVTIGENLKLNDVLPQQFFTKPP
ARFTEAALVKELEKRGIGRPSTYASIISTIQERGYVRTENRRFYAEKMGEIVIDRLNQSF
PALMNYDFTANMEDVLDEIATGKKDWKTELNQFFTDFSKQLTQAELDELEGGMKPNNLVL
TDIKCPTCDRNMAIRTASTGVFLGCSGYALPPKERCKTTINLIPESEVLNVLDELSEAKA
LMVRKRCPKCNTAMDSYLIDANRKLHICGNNPNCDGYLIEEGEYKIKGYDGPVVECDKCG
EDMHLKLGRFGKYMACTNCDNTRKLLKNGEVAPPKEDPVHFPELKCEKSDAYLVLRDGAS
GVFMSAHNFPKSRETRAAKVAELAKYRDRLPEKLQYLADAPLKDPEGNEAIIRFSRKEKR
QYVTSEKEGKATKWLVDYTDGKWIERKKAK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctttagtgattgtagagtcgccagctaaggcaaaaaccataaataagtat
ttaggcagtaattacattgttaagtctagtgttggacatattcgagatttacccacttct
ggttcttcaacgggtgaaaaggcaaaacctgtttcaacaaaaggattaacagccgaagaa
aagaaaaaaattaaagctgagaaagatcgtgttgcacttgtaaaaagaatgggtattgat
ccttatcatagctggaaagcgaattatcaaattttgccaggtaaagaaaaagttgtttct
gaattaaagtctttggctaaaaaagcagatcatatttatcttgctaccgatttggataga
gaaggggaagcaatcgcttggcatttaaaagaagtgattggtggtgaagattcacgcttt
agtcgagtagtttttaatgaaattactaaaaatgccattactcaagcctttgagaaacca
gaacatttaaatttagatcgtgttaatgctcaacaaacacgccgttttttagatcgtgtg
gttggctttatggtttcgccattactttggaaaaaagtagcacgaggtttatctgctggg
cgtgttcagtcggttgccgtaaagttactagtggaacgtgaacatgatattaagtctttt
aaaccagaagaatattgggaagtttcggttgttactcaaaataccaagaaacaaaaaatc
gagttagaagtaacagattttaatggcaagaaatttttaccaaaaaatgaagaacaagct
caaagtgcggttcaatttttagaaaattctcattatgttgtttctaatgtggaaacaaag
cccactagctccagagcaaaaccgccttttattacgtcaacattacagcaaacagcaagt
accagattaaattttggtgtaaagaaaacgatgatgttggcacaacgtttatatgaagcg
ggttatattacttatatgcgtaccgatagtatgaatctaagccaagatgcgttatcaatg
gtgcgtgattatattggtaaaaattatggtcaaccttatttaccagaaaaacctaatttt
tatgcaagtaaacagaatgcacaagaggctcacgaggcgattcgaccttctgatgtatta
gttaaaagtagtgatttagttggaatggataaagatgcggtacgtctttatgatttaatt
tggtgtcaatttgtcgcttgtcaaatgcctgctgcgcaatatgacagtaccacgttaaca
gtagctgcgggtgattatgttctaaaaacaaggggacgtattttacgttttgatggttgg
acgaaagtacttggcttatcaggtaaaagtggtgaagatcaagttttaccagaagtgact
attggtgaaaatttaaaattaaatgatgtattgccacaacaattctttactaaaccaccc
gctcgatttacagaagcggcattagtcaaagaattagaaaaacgaggaattggcagacct
tctacctatgcttccattatttctactattcaagaacgaggttatgtaagaacagaaaat
cgtcgtttttatgcagagaaaatgggcgagatagtaattgatcgcttaaatcaatctttc
ccagcattaatgaactatgattttaccgctaatatggaagatgtattagatgaaatcgct
acgggtaaaaaagactggaaaactgagttaaatcagttttttactgatttctctaaacaa
ctgactcaagctgaacttgatgagcttgaagggggaatgaaaccgaataatctagtgtta
acggatataaaatgccctacttgtgatagaaatatggcaattagaacagcgagtacaggc
gttttcttaggttgttctggttatgctttgcctccaaaagagcggtgtaaaacaaccatt
aatttaatacccgagtctgaagtattaaatgtattagatgaattatccgaagctaaagcc
ttaatggttcgtaagcgttgtccgaaatgtaatacggcaatggatagttatttaattgat
gccaatcgtaagttacatatttgtggcaataacccaaattgtgatggttatttaatcgaa
gagggtgagtataagatcaaaggttatgatggccctgttgttgaatgtgataaatgtggc
gaggatatgcatttaaaacttggtcgttttggtaaatatatggcttgtactaattgtgat
aatacacgtaagttactcaaaaatggcgaagttgcaccaccaaaagaagatcctgttcac
ttccctgaattaaaatgtgaaaaatcagatgcttatcttgtattaagagatggtgcaagt
ggtgtatttatgtcagcacataatttcccaaaatcaagagaaacgagagcagctaaagtg
gctgaattagctaaatatcgagatcgtttacctgaaaagttacaatatttagctgatgca
ccattaaaagatcctgagggaaatgaagcaattattcgtttctcaagaaaagaaaaacgt
cagtatgtaacctctgaaaaagagggaaaagcaacaaaatggcttgttgattatactgac
gggaaatggattgaacgtaaaaaagctaaatag
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