Bisgaardia hudsonensis: A6A11_05845
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Entry
A6A11_05845 CDS
T06663
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bhud
Bisgaardia hudsonensis
Brite
KEGG Orthology (KO) [BR:
bhud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhud03016
]
A6A11_05845
Enzymes [BR:
bhud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6A11_05845
Transfer RNA biogenesis [BR:
bhud03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6A11_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ctf19_RWD2
Motif
Other DBs
NCBI-ProteinID:
QLB13168
LinkDB
All DBs
Position
complement(1275596..1276747)
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AA seq
383 aa
AA seq
DB search
MTSEIKELLSLPDFKVVKDNIALLQVCEQAEQKKFVALDTEFVRVRTFFPKLGLIQLYDG
ENISLIDPLEITDFTPFIKLLANQNILKILHACSEDLEVFQHYFKQLPSPMIDTQIMANF
LKFGNSTGLAKLLQHYFGLEMDKSSSRTDWLARPLSAQQLAYAAADVWYLLPLYQKMQVD
LAKVGWESAAQEDSHYLLNKCLKIKDTNYVYFNIPNAWQLESIELMRLQLLAKWRYEEAI
KRDKAINFVVKGENLWRVAKENPKHTSQLLAIGLSVSEVRIHGKKILQILDQCKRIDPTD
YPPKIERISTDPDYRKILKLLQKALKEITPETLLPEVITSKKFLEHLIKWCWLKNEDSDN
LPELLSGWRREFGLQLLEIIKKY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagaaataaaagaattgttatctttacctgattttaaggtagttaaggataat
atcgcattactacaagtatgtgagcaggcggagcaaaaaaaatttgttgcccttgatact
gaatttgttcgagttagaaccttttttccaaaattagggcttattcaactttatgatggt
gagaatattagtttaattgatcctttagaaattaccgattttactccttttatcaaatta
ttggcaaatcaaaatattcttaaaatattacatgcttgtagtgaggatttagaagttttt
caacattatttcaagcagttacctagtccaatgatagatactcaaattatggcaaatttc
cttaaatttggtaattcaacaggattagcgaaattactgcaacattattttggtttagaa
atggataaaagctcatcaagaacggattggttagcaagaccattatcagctcagcaattg
gcttatgctgcagcagatgtatggtatttattgcctctatatcagaaaatgcaagttgat
ttagctaaagtaggttgggaaagtgcagcacaagaggatagtcattatctacttaataaa
tgtttaaaaattaaagatactaattatgtttattttaatatcccaaatgcttggcaatta
gagtcgatagaattaatgcggttacaattactggcgaaatggcgttatgaagaagcgatt
aagcgagataaagcaatcaattttgttgtaaagggagagaatctttggcgagtagcgaaa
gaaaatcctaaacatacttctcaattattagctataggattatctgtttcagaagtgcgt
attcatggtaaaaaaatattacaaatacttgatcaatgtaaacgcattgatcctactgat
tatcctcctaaaattgagagaatatcaacagatccagattatcgtaagatattaaaatta
ttacaaaaggcattaaaagagatcacgcctgaaactttattgccagaagtaatcacaagt
aaaaaatttttggaacatttaataaagtggtgttggttaaaaaatgaagattccgataat
ttacctgaattgctgagtggatggcgtcgagaatttggcttacaattattggaaataata
aaaaagtattaa
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