Brevibacillus humidisoli: LOK74_06850
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Entry
LOK74_06850 CDS
T08900
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhui
Brevibacillus humidisoli
Pathway
bhui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOK74_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhui03019
]
LOK74_06850
03009 Ribosome biogenesis [BR:
bhui03009
]
LOK74_06850
Enzymes [BR:
bhui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOK74_06850
Messenger RNA biogenesis [BR:
bhui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LOK74_06850
Ribosome biogenesis [BR:
bhui03009
]
Prokaryotic type
rRNA helicases
LOK74_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Helicase_RecD
Flavi_DEAD
Zap1_zf2
Motif
Other DBs
NCBI-ProteinID:
UFJ42211
LinkDB
All DBs
Position
1376338..1377927
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AA seq
529 aa
AA seq
DB search
MTIFADFTLHKSVLQAVHDMGFEEPSPIQAACIPKILEGGDLIGQAQTGTGKTAAFGIPL
IEKMTPANRIQAVVLTPTRELAIQVAGELRRIAKYKKIRTLPIYGGQSIMHQIRALRQGV
QVVIGTPGRVLDHLRRKTLRLDNVSMLVLDEADEMLDMGFIDDIETIINHINEDRQTLLF
SATMPAEIKRLASRYMKQPQTVAVSREEVTAPSIEQVYYKVFERNKLESLCRILDSEDVE
LGIIFCRTKRGVDELTETLQTRGYLADGLHGDLSQAQRDKVMKAFREGTIELLIATDVAA
RGIDVGNVSHVINYDIPQDPESYVHRIGRTGRAGRHGIAMTLVTPREMKQMVVIQKQTKA
AIITRNVPTLEEVAERKQEQLREQLINLLEGDAVAEMYDKVAQSLLADYPAEKIAAAALH
LAFHSELGDNEEGELYNFGETGASKGMVRFFLNVGRNANLKPQDLVKEISESVGIPGKAV
GRIDIFENFTFVEVPEDVAPFVYEGLRQTRINGKRINLEPAKPRTRTRR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttttgcagatttcactctacataagagtgtgttacaagcagtacacgacatg
gggtttgaagagccatcaccgattcaggccgcgtgtattcccaaaatccttgaaggaggc
gacctgatcggtcaggcacaaaccggtaccgggaagacggcagcctttggtataccttta
atcgagaaaatgacgcctgccaatcggattcaggcggtcgtgctgactccgacacgggag
ttggccatacaagtggcaggtgaactgcgccggattgccaagtacaaaaaaatccgtacc
ctgccgatctatggcggtcagtcgatcatgcatcaaatccgtgcgctgaggcaaggggta
caggtagtgatcggaacgcctggacgtgtacttgaccacctccgtcgcaagacgctgcgc
ctggataatgtcagcatgctggtgcttgatgaggcggatgaaatgctggacatgggcttt
atcgatgacatcgagacgatcatcaaccacatcaacgaagaccggcaaaccttgctcttc
tccgcaaccatgccggctgagatcaagcgtctggcatcccgctacatgaagcagccgcaa
accgttgcggtgagtcgtgaggaagtgacggctccgagcatagagcaggtctactacaag
gtgtttgagcgcaacaaactggagagcttgtgccgcatcctggacagtgaagatgtggag
ttgggtatcattttctgccgcaccaagcgcggcgtggatgagctgacggaaaccctgcag
acacgaggctatttggccgacggactgcatggagacctctcccaggcacagcgggacaaa
gtgatgaaagcattccgggaggggacgatcgaactgctgatcgcgaccgatgtggcggcg
cgcggtattgacgtgggcaacgtgtcacacgtgatcaattacgacattccacaagatccg
gagagctacgttcaccggattggccggactggccgggctggacgtcatggaattgcgatg
acgctggttacaccacgtgagatgaagcagatggtcgtgatccaaaaacagaccaaagca
gcaatcattacccgcaacgtgccgacgctggaggaagtggcagagcggaaacaggaacag
cttcgcgagcagctgatcaacctgttggaaggcgatgcggtggcagagatgtacgacaaa
gtggcacaatcgctgttggctgattatccggctgagaagatcgcggcagctgccctgcac
ctggccttccacagcgagctgggggacaatgaggaaggagaactgtacaacttcggtgaa
accggggcctccaagggcatggtgcgcttcttcctcaatgttggacgcaatgctaatcta
aagccgcaggaccttgtaaaggaaatctccgagtcggttggcattccgggtaaagctgtt
ggcagaatcgacatctttgaaaacttcacctttgtcgaggtgccggaagatgtcgcgcct
tttgtctacgaagggctgcgccagacgaggatcaacggcaagcggatcaacctcgaaccg
gcgaaaccacgcacccgaacaagaagataa
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