Brevibacillus humidisoli: LOK74_12365
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Entry
LOK74_12365 CDS
T08900
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bhui
Brevibacillus humidisoli
Pathway
bhui03030
DNA replication
bhui03430
Mismatch repair
bhui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOK74_12365 (holA)
03430 Mismatch repair
LOK74_12365 (holA)
03440 Homologous recombination
LOK74_12365 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhui03032
]
LOK74_12365 (holA)
03400 DNA repair and recombination proteins [BR:
bhui03400
]
LOK74_12365 (holA)
Enzymes [BR:
bhui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOK74_12365 (holA)
DNA replication proteins [BR:
bhui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOK74_12365 (holA)
DNA repair and recombination proteins [BR:
bhui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOK74_12365 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UFJ38879
LinkDB
All DBs
Position
complement(2484936..2485976)
Genome browser
AA seq
346 aa
AA seq
DB search
MPLHTAVQAIKEKQYASVYVLYGTETYLMDEFVSFASREIVPPDSADLNLSRYDCAEVPL
QSILEDAETLPFLAEHRVVIAANAYFLTGAKPPSKLEHNLAALEQYLEQPPAYASILFLV
YADKLDERKKLVKSLKKQATVLSFAPLRDGDLLAWVQRRAERHGVRMERVRVQQLVDRVG
SDLRLLNNELEKLALYLGTPGAVITDDVIEQLTPRTLEQDVFRLVDAVVAGRLPEAFRTL
YDCLLTGEEPLKLLALLARQFRLLLHVKLWAPRGYSQQQLAGMLKVHPFAVKKAMEQTRY
FDEASLRRLLGLFAEEDFRIKSGQVDKRLALELLMTRVAAELKPAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcacacggccgtgcaagcgataaaagagaagcagtacgcctcggtgtacgta
ctgtacggaacagagacgtatttgatggacgagtttgtctcgtttgccagtcgtgaaatt
gtcccgccagatagtgccgacttgaacctcagtcggtatgactgtgcggaagtaccgctg
cagtcgatcctagaggatgcggagaccctgccgtttttggcagagcacagagtggtgatt
gctgctaacgcctattttttgacgggagcaaaacctccgagcaaactggagcataatctt
gctgcgttggaacagtatctcgaacagccgccagcgtacgcgtcgatcctgtttctggtc
tatgccgacaagctggatgaacggaagaaactggtcaagagcttgaaaaaacaggcgacc
gtgctctcgttcgctccgttgcgggatggcgacctgctcgcttgggtacaacggcgggcg
gagcgtcatggggtacggatggaacgggtacgggtacagcagttggtcgacagggtcgga
tccgacctgcgtctgttaaacaacgagttggagaaactggccctttacctgggtacgccg
ggtgcggtcatcaccgatgatgtgattgagcagttgacaccccgtacgttggagcaggat
gtgttcaggctggtcgacgcggttgttgcgggtaggctgccggaagcatttcgcacactg
tacgactgtctgttgacaggagaagaaccgctcaagctgctcgcgctgctggcccgacag
ttccggctgctgctgcatgtcaagctgtgggctccacgcggatacagccaacagcagttg
gccggcatgctaaaggtgcacccgtttgccgtgaagaaagcgatggaacagacgcgatac
tttgatgaagcatctctgcgccgcttgctggggctgttcgcggaggaagacttccgcatc
aaatcaggtcaagtggacaagcggttggcgttggaactgttgatgacccgtgtagccgct
gaattgaagccagcgcggtag
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