Brevibacillus humidisoli: LOK74_12920
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Entry
LOK74_12920 CDS
T08900
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bhui
Brevibacillus humidisoli
Pathway
bhui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOK74_12920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhui03400
]
LOK74_12920
Enzymes [BR:
bhui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LOK74_12920
DNA repair and recombination proteins [BR:
bhui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOK74_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
HHH
AAA_11
Viral_helicase1
UvrD-helicase
nSTAND3
AAA
AAA_16
AAA_22
AAA_29
AAA_23
UvrD_C
AAA_12
DEAD
DUF4537
AAA_28
AAA_25
T2SSE
NTPase_1
RecR_HhH
Zeta_toxin
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UFJ38984
LinkDB
All DBs
Position
complement(2603084..2605354)
Genome browser
AA seq
756 aa
AA seq
DB search
MSQQTLSLFVEPFIRGQVVREIYFNEENWYGVYRFQVEETNESISEKEVVVVGHFPRPHP
DEVYTFYGEWKVHPRFGSQYSVNRYERETPKTAAGVEKYLASGLFEGIGKKTAKRIVAHL
GVDALSVIADNPEQLEQVPGISRERARKIYDSVLEHRMLERTMVFLYDFGIGVHLALRIY
QTYKSETMDILQTSPYKLVEDIDGIGFKRADEIARAVGVAASSPERVKAAVLYTLKEAAY
GEGHVYLPVAELADRSRRLLAECGGHSFQDDELTLAIQHMFEEQKLIWDDDRAYLSTLFF
AEIGLAKQLRYFAKRAFQEAFPASEYYRALGKVEEELGITYAASQREAVEQALQSGLMLL
TGGPGTGKTTVIRAICCVFAELNGLSLDPKQYDPYENPFPILLVAPTGRAAKRMTETTGL
PAMTIHRLLGWNGDSFEYDQERQVHGRLLIIDEMSMVDIWLANQLFRALPDDIQIVMVGD
PDQLPSVGPGHVLQDMIDSGLIPQVHLHDIYRQAEQSSIIRLAHDIREGKVPEDLLSPAP
DRRFFTSSPQDLVRIVKQICEGAVKKGYTPKEIQVLSPMYKGNAGVNQLNQELQDLFNPK
TEQKREVSYGETVFRTGDKVLQLVNNAEEQVYNGDIGEIVAIFRPNENEQQEELLVVLFD
GKEVAYKRSQYHQLTLAYCCSVHKSQGSEFPIVIMPFVRQYYRMLRRKLVYTGVTRSKSY
LLLCGDPEAFRLAVENDDESVRHTYLRQRLVGQETD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaacagacgctctccctgtttgtcgaaccgtttatccgaggacaagtggtgcga
gaaatttacttcaatgaagagaattggtacggggtgtatcgttttcaggtagaggagaca
aacgaatcgatcagcgaaaaggaagtcgttgtggttggccactttccgcgccctcatccc
gatgaggtgtatacgttctacggtgagtggaaggtgcatccgaggtttggcagtcagtat
agtgtcaatcgttacgagcgggagacacccaagacggcagcgggtgtggaaaagtatttg
gccagcgggttgttcgaggggatcggcaaaaagacggccaagcggattgtggcccacttg
ggggtggatgcgctctcggtgattgctgataacccggagcagttggagcaggttccgggg
atttcacgtgagcgggcgcgcaaaatctacgattcggtgttggagcaccgcatgttggag
agaaccatggtcttcctctacgattttggcatcggtgttcatctcgccctccgcatctac
cagacctacaaatcagagacgatggacatcttgcaaacgtcaccgtacaagctggttgag
gatattgatggcatcggctttaagcgggctgacgagattgcccgcgccgttggcgtcgct
gcttcttcgccggagcgggtcaaagcggctgtactctatacgctgaaagaggccgcttat
ggagaggggcatgtctatctgccggttgccgaactggcagataggagccgcagattgctt
gcggaatgcgggggtcattcgtttcaagacgatgaactgacacttgccatacagcatatg
tttgaagagcaaaagctgatctgggacgatgatcgtgcctatctgtcgactctctttttt
gcggagatcggcttggccaagcagcttcgctattttgccaaacgagcttttcaggaagcg
tttcccgcttcggaatattatcgggcgttaggcaaagtagaagaagagctggggatcacg
tacgctgcttcccagcgggaagcggtggaacaagcgctgcagagcggcctgatgctgctg
accggcggacccggaacgggcaagaccaccgtgatccgtgccatttgctgcgtcttcgcg
gagctgaacggtctttcgcttgatcccaagcagtacgatccgtatgagaatccgttcccg
atcctgctcgttgcacccactggcagagcggcgaagcggatgacagagacaaccggcctg
ccggcgatgacgattcaccgtttgcttggatggaatggcgacagcttcgagtacgatcag
gaacgtcaggtgcacggcaggcttctgatcattgacgagatgtcgatggtagatatttgg
cttgccaaccagttgttccgtgccctgccggatgacatccagatcgtgatggtcggcgat
cccgatcaactgccctcagtaggaccgggccatgtgctgcaggacatgatcgattccggc
ctcatcccgcaggttcacctgcacgacatctaccgtcaggcggagcaatcctcgatcatt
cggctagcccatgacattcgcgaggggaaggttccggaggatctgctgtcccctgcccct
gatcgcagatttttcacaagttcgccacaagatcttgtgcgaatcgtgaaacaaatctgt
gagggagccgtaaaaaaagggtacacaccaaaagagattcaggttctttccccgatgtac
aagggaaacgcgggtgtcaaccagctaaatcaggaactgcaggatttgtttaacccaaag
acggagcaaaagcgggaagtttcgtatggagagactgtgttccgcaccggtgacaaagtg
ctgcagttggtcaacaacgccgaggagcaggtgtacaacggtgacattggcgaaatcgtc
gctatttttcgccccaacgaaaatgagcagcaggaggaactgctggtggttttgtttgac
ggcaaagaggtggcctacaaacgttcgcagtaccatcaactaaccttggcttactgctgt
tctgtgcacaagtcgcagggaagcgagttcccgatcgtgatcatgccgtttgtccgtcaa
tactaccgcatgcttcggcgtaaactggtatacaccggggtaacacgcagcaaatcgtat
cttttgctctgcggggaccccgaggcctttcgtctggccgttgaaaacgacgatgaaagt
gtacgccacacctatctgcgacagcgacttgtaggtcaggaaaccgactga
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