Brevibacillus humidisoli: LOK74_19735
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Entry
LOK74_19735 CDS
T08900
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bhui
Brevibacillus humidisoli
Pathway
bhui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOK74_19735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhui03400
]
LOK74_19735
Enzymes [BR:
bhui01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LOK74_19735
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LOK74_19735
DNA repair and recombination proteins [BR:
bhui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOK74_19735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Ribosomal_S13
DUF1631
Motif
Other DBs
NCBI-ProteinID:
UFJ40242
LinkDB
All DBs
Position
4048207..4049016
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEMETYRKLLTEKISGRRITRVMINREKSVNLPVAAFVDAVQQRSLLSVERRAKHL
LFRLDNGTVLLLHLMLGGFLYYGSQQEKLDRTAQVVLCFGEDKLFFHGLRLGYLHLLSTD
AVDEKLDPLGPEPLALSFDEQSLRQRLVGKRGMLKPTLTDQSFIAGIGNCYSDEICFQAQ
LKPMRKCNQLQEGDIARLYRSITGVLTKAVSLGGYMENPLFAGDSLTGGYNRHCLVYDRE
GEPCLRCGSPIRREKLSARKTFFCPVCQA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcctgaaatggagacctaccgcaaactgctgacagaaaaaataagcggg
cgcagaatcacccgcgtgatgatcaatcgagaaaaatcggtcaatctgcctgtcgcagcg
tttgtcgatgccgtacagcagcgcagcttgctgtctgtcgaacggcgggccaagcacctg
ctgttccgtttggacaacggaactgtcctgctgctgcacctgatgctaggcggatttctg
tactatggcagccagcaggaaaagctggatcgcaccgcccaagtcgtcctttgctttgga
gaggacaagctgttttttcacgggctgcggttgggctaccttcacctgctgtctactgac
gctgtcgatgagaagctggacccgcttggaccggagccgctcgccctgtcatttgacgaa
cagagcctgcgtcagcggcttgttggcaaaagagggatgctgaaaccaaccctgactgat
caatcgtttatcgccgggatcggcaactgctactcagatgaaatctgttttcaagcccag
ctgaagccgatgcgcaagtgcaaccaactgcaggaaggtgacatcgcccgtctgtaccgc
tcgattaccggggtgctaaccaaagcagtgtcactcggcggctatatggagaatccgctg
tttgcgggagacagcctaaccggaggatacaaccgtcactgtctcgtctacgatcgtgaa
ggggagccgtgtctccgctgcggcagtccgattcgacgtgagaagctttcggcgcgcaag
actttcttttgtcctgtctgccaagcctga
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