Brevibacillus humidisoli: LOK74_20085
Help
Entry
LOK74_20085 CDS
T08900
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bhui
Brevibacillus humidisoli
Pathway
bhui03420
Nucleotide excision repair
bhui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOK74_20085
03430 Mismatch repair
LOK74_20085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhui03400
]
LOK74_20085
Enzymes [BR:
bhui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOK74_20085
DNA repair and recombination proteins [BR:
bhui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOK74_20085
MMR (mismatch excision repair)
Other MMR factors
LOK74_20085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PhoH
AAA_30
SLFN-g3_helicase
AAA_16
NACHT
DEAD
NPHP3_N
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UFJ40308
LinkDB
All DBs
Position
4126315..4128699
Genome browser
AA seq
794 aa
AA seq
DB search
MSKQENPVKPDWQEEQRRVDQVVDEIDRRIETLEQQVRKTKEDIVDIRKNFWDDVTVNLD
DAIEAIETYASMKQQAEVLSERERTHRHGFRQLATLIRLKHSPYFGRIDFTEDGETETEQ
IYLGIASLLDQAEEQFLIYDWRAPVASLYYDYPPGPAQYATPSGTITGTMDLKRQFIIRD
GKIRSLFDTGVTIGDELLQEVLGNQANTQMKSIVATIQKEQNQIIRNERSHLLIVQGAAG
SGKTSAALQRVAYLLYRYRETLQAEQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEY
LDRRLGKRFILEDPFTQLEYALTAMHEPGYQSRMEGIRFKASLSFMKMIERYVHSLGRDG
MLFADIVFREQTLISAASIKEYFYSLDPSLSIPNRMELTAKWLLGELKARARLERKKPWV
EDEIELLDKEDFLQAYQQLQKKKRFGGDTFDDHQQEQKVLAAMVVNEHFKPIRANAKRLR
FIDVLALYRQLFADPQYSARMAADGLSIDPATWDAICMQTVERLDRGELAYEDATPFLYL
QEQLSGFQTNNAVRHVFIDEAQDYSPFQFAFIKRLFPRSKMTVLGDLNQSISAHADTSET
SFEGLSTLFDEDRTETIVLTRSYRSTRPIVEFTRQLLPAGEAIEPFNREGSLPTVTQVGS
PAELATEVSKRIRQLLQTGHRTIAVICKTAQESRQACEAMRGDIPIRIIGKETASFESGV
LVIPAYLAKGVEFDAVIIYNGSREQYARESERKLFYTACTRAMHELHIYTVGEISPFLTR
VSSDAYQWESSLCR
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacaagagaacccagtaaagccggattggcaggaggaacagcggcgggttgat
caggttgtcgatgaaatcgatcggcgcatcgagacgctggagcagcaggtcagaaaaacc
aaagaagatattgtggacatccgcaaaaacttctgggacgacgtgacggtcaacctggat
gacgcaatagaagcgatcgagacctatgccagcatgaaacaacaagcagaagtcctgtca
gaaagggaacggactcataggcatggattccgtcagttggcaacactgattcgtctcaag
cactcaccctattttggcaggattgactttacggaagatggggaaacagagacggaacag
atctacctggggatcgcttcccttctcgatcaagcagaagagcagtttctgatctacgat
tggcgggcaccggtagccagtctctattacgactatccgcctggccctgcgcagtacgcg
actcccagcggcaccatcaccggaacaatggacttgaaacgccagtttatcatccgggat
ggcaagatccgcagcctgtttgacaccggagtcaccatcggcgatgaactgctgcaagaa
gtgctgggcaatcaggcgaacacccagatgaaaagtattgtcgctacgatccaaaaagag
caaaaccagatcattcgaaatgaacgcagtcacttgctgatcgtgcagggagcagcaggc
agcggcaagacatcagccgctctccagcgcgttgcctatctattgtatcgataccgggaa
acgctgcaggctgaacaaatcgtactgttttcccccaatccgatgttcaacagctacgtt
tccactgttcttcctgagttaggggaggaaaacatgcagcaaacgacgtttcaagagtat
ctggatcgtcgactcggcaaacgatttatcctggaagacccgttcacccaactggaatac
gccctcacggcgatgcatgaaccgggctatcagtccagaatggaaggaatccgttttaaa
gcctccctctctttcatgaagatgatcgaacgatatgtccactctctcggtcgggacggg
atgctctttgcggatatcgtgttccgggagcagacattgatatctgctgccagtatcaag
gaatacttttacagtctggatccctccttatcgattcccaatcgtatggaattgaccgcc
aaatggctgcttggagaattaaaagcgcgggctcggctagagcggaaaaagccttgggtg
gaagacgagatcgagctgctggacaaggaggatttcctgcaggcctatcagcagcttcag
aagaaaaagcggtttggtggtgatacgtttgacgaccatcagcaggaacagaaagtgctt
gctgccatggtggtcaacgagcacttcaagcctattcgtgcgaacgcaaaacgactccgc
tttatcgatgttctggcgctctatcgacagttatttgccgatccgcagtacagtgcccga
atggcagccgatggcctctccatcgatcctgcgacatgggatgcgatctgtatgcaaacc
gtggaacgcttggatcgtggggagcttgcctacgaagatgcaactccattcttgtatttg
caagaacagctgtctggattccagacgaacaacgcggtgcgacatgtcttcattgatgag
gcgcaagactattcaccgtttcagtttgcctttatcaaaaggctgtttccacggagcaaa
atgacggtacttggggatctgaaccagtcgatttcggcacatgcggacacgtccgagacg
agttttgaaggcctgtccacgctgtttgatgaagatcgtaccgagacgatcgtattgacg
cgcagttatcggtccacccggcccatcgtagagttcacccgccaactactgcctgcagga
gaagccattgagccgttcaaccgggaaggcagcctgccgactgtcacacaggttggatct
ccagcagagttggccacagaggtgagcaagcgcatccgccaactcctgcagacaggacac
cgtaccattgccgtgatctgcaaaacagctcaggaaagtcgccaggcctgcgaggccatg
cgaggcgacatcccgattcgtataatcggaaaagagaccgcttctttcgagtctggtgta
cttgttattcccgcttatctggccaaaggggtcgaattcgacgctgttatcatctacaac
ggttcgcgtgaacagtacgcaagagagagtgagcgcaaattgttttacactgcctgtact
cgggcgatgcacgaattgcacatatacacagtcggtgagattagtccgtttctgacgaga
gtttctagtgacgcctatcagtgggagtcatctctctgtcgatga
DBGET
integrated database retrieval system
