Brevibacillus humidisoli: LOK74_21240
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Entry
LOK74_21240 CDS
T08900
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bhui
Brevibacillus humidisoli
Pathway
bhui03030
DNA replication
bhui03430
Mismatch repair
bhui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOK74_21240 (holB)
03430 Mismatch repair
LOK74_21240 (holB)
03440 Homologous recombination
LOK74_21240 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhui03032
]
LOK74_21240 (holB)
03400 DNA repair and recombination proteins [BR:
bhui03400
]
LOK74_21240 (holB)
Enzymes [BR:
bhui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOK74_21240 (holB)
DNA replication proteins [BR:
bhui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOK74_21240 (holB)
DNA repair and recombination proteins [BR:
bhui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOK74_21240 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
AAA_18
Acyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UFJ40519
LinkDB
All DBs
Position
4375108..4376088
Genome browser
AA seq
326 aa
AA seq
DB search
MTWSQITEQPRVTDLLQASLTNDRLAHAYLFTGPRGTGKMRIAMHLAKSIFCRQHSHDAC
EQCVNCQRISGGNHPDVFVVRPDGASIKIDQIRALQKEMTMRSLESPHKVYVIEHVDKMT
VQAANSLLKFLEEPPKGVVAILLTENSHALLPTILSRCQIIPFSPLPVELLASQLIAEGI
PSGMAHLACQITTQLDEARELSQSDWFAQLRNEVIQLSQDCKQRGSYALYSIQELFVKNE
RLKEELPLFLDMLILWLRDVLYVQVGRHAQLIYRDQQDMLERQAYVWTQAELMQGIGLAM
DTRNRIERNANPQLALERLVLQLQGG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacttggagccaaatcacggaacaaccgcgggtaacggatctgctgcaggcaagcctg
acgaacgatcggttggcccacgcctatttgtttacagggccgcgggggacgggcaagatg
cgcattgcgatgcacctggccaaatcgatcttttgccgccagcattcccacgatgcatgt
gagcaatgcgtcaactgccagcggatctcaggaggcaatcatcccgacgtattcgtggtc
cgaccggatggagcctcgatcaagatcgatcagatcagggctttgcagaaagagatgacc
atgcgttcactggagtccccacacaaggtgtacgtgatcgaacacgtagacaagatgacg
gtccaagctgccaacagtttactgaagtttctggaggaaccacccaaaggggtggtggct
atcctgcttacggaaaacagtcatgcactgcttccaaccattctctcccgctgtcaaatc
atcccgttttccccgctgccggttgaacttctggcttcacagttgatcgccgaagggatc
ccgtccggtatggcccatctggcttgtcaaataacgacacaactggatgaagcgagggaa
cttagccaatcagattggtttgcacagcttcgaaacgaagtgatacaattgtcacaggac
tgtaaacaacgcggctcttacgcgctgtattcgatacaagaactttttgtcaagaatgag
agattgaaagaggaactgccactatttctggatatgctcatcttatggctgcgcgacgtt
ctctatgtgcaggtaggtcgccatgcgcagttgatatacagagatcaacaggatatgctg
gagcgtcaggcttatgtctggacccaggcggaacttatgcaggggatcggactagccatg
gatacgagaaatcggatcgagcgtaacgcgaatccacagttggcgttggaacggctggtt
cttcaactccaggggggataa
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