Bacteroides humanifaecis: JXR92_000880
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Entry
JXR92_000880 CDS
T08258
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JXR92_000880 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhum03400
]
JXR92_000880 (xseA)
Enzymes [BR:
bhum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JXR92_000880 (xseA)
DNA repair and recombination proteins [BR:
bhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JXR92_000880 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
SKA2
YjdM
Motif
Other DBs
NCBI-ProteinID:
UDB45767
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Position
complement(209519..210769)
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AA seq
416 aa
AA seq
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MEALSLQELNALVRRSLEQCLPDEFWVQAELSDVRTNSTGHCYLEFVQKDPRSNSLVAKA
RGTIWANVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYGYSLTVQDIDPTYTLGDM
ARRRREILRQLEEEGVLTLNKELDIPRLPQRIAVISSPTAAGYGDFCHQLENNSRGFYFY
TELFPALMQGDRVEESVLSALDRVNARLSEFDVVAIIRGGGATSDLSGFDTYLLAAACAQ
FPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIDLMNNAADELEMLVSRLHEGVRN
LLQQEQRKLSVCKNRIPSASYRCISDAKIALLTARKDVVQAVTSYLSRHRHRLELLQQRL
VDVSPEKLLARGYSITLKDGKVVKNVGLLNEGDEITTLLQKGEVTSIVNRKPSNRK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttgtctttacaagagttgaatgcccttgtgcgccgtagtctggagcagtgt
ctccccgatgagttttgggtgcaggcagagttgagcgatgtgcgtaccaacagtacaggg
cattgctatctggaatttgtgcagaaagatccccgtagcaatagtctggtagctaaggcg
agaggcaccatctgggcaaatgtgtttcggttgctgaagccctattttgaggaggctacg
gggcaggcatttgtttcgggcatcaaagtgctggttcaggtcactgtcagtttccacgaa
ctttatggatatagtttgacagtgcaggacatagatcccacctatacgttgggcgatatg
gcgcgtcgccgcagggaaatattgaggcagcttgaggaggagggagtcctcactcttaat
aaagaactggatataccccgcctgccgcaacgtattgccgtcatatcttcaccgacggcg
gcgggctatggtgacttctgtcatcagctggaaaacaattcccgggggttctacttttat
acggagctgtttcctgccttgatgcagggtgaccgtgtagaggagtctgtcctttctgct
ctcgaccgggtgaatgcacgcttgtccgagtttgatgtggttgccattattcgcggtgga
ggcgccacgtccgacttgtccggtttcgatacctatctgcttgctgctgcttgtgcacag
tttccgttacctatcataacgggtatcggtcacgagcgggacgacacggtgctggattct
gtggcacatacccgtgtaaagacccctacggccgccgccgagttcttgatagacctcatg
aacaatgccgccgatgaactggaaatgcttgtttcccgcttgcatgagggggtcaggaat
ctgttgcagcaggaacagcgcaagttgtctgtttgcaagaaccggattccttctgcttca
taccgttgcatatccgatgcaaaaatagctttactgactgcgcggaaagatgtagtgcaa
gctgtcacttcctatttgtcccgccatcgccaccgtctggaattgttgcagcagcgcttg
gtggatgtttcaccggaaaagctgcttgcccgcggttacagcatcacgttgaaagacggg
aaggttgtgaaaaatgtcggcttgctgaatgaaggagatgaaatcaccaccctgctccaa
aaaggagaagtaacctcaatcgtaaatcgtaaaccgtcaaatcgtaaataa
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