Bacteroides humanifaecis: JXR92_003965
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Entry
JXR92_003965 CDS
T08258
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bhum
Bacteroides humanifaecis
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhum03016
]
JXR92_003965 (miaB)
Enzymes [BR:
bhum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JXR92_003965 (miaB)
Transfer RNA biogenesis [BR:
bhum03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JXR92_003965 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
FlgH
Motif
Other DBs
NCBI-ProteinID:
UDB44824
LinkDB
All DBs
Position
complement(994771..996144)
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AA seq
457 aa
AA seq
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MEKVTGADFKSATADDNKKLFIETYGCQMNVADSEVIASVMQMAGYSVADTLEEADAVFM
NTCSIRDNAEQKILNRLEFFHSLKKKKRGLIVGVLGCMAERVKDDLITNHHVDLVVGPDA
YLTLPELIASVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIV
PYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYRFEKPDGETVTFPMLLRTVA
EAAPGVRIRFTTSHPKDMSDETLQVIADMPNVCKHIHLPVQSGSSRILKLMNRKYDREWY
MDRVAAIRRIIPDCGLSTDIFSGFHSETEEDHQLSLSLMEECGYDSAFMFKYSERPGTHA
SKHLPDDVPEEVKIRRLNEIIALQNRLSAEANARCVGKTYEVLVEGVSKRSRDQLFGRTE
QNRVVVFDRGTHRVGDFVMVKVTESSSATLKGEEVAG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtaacgggagcagactttaaatctgcaactgctgatgacaacaagaagttg
tttatcgagacttacggctgccagatgaatgtggccgacagtgaagtgattgcatccgtc
atgcagatggcgggatattcggtggccgacaccctggaggaagccgatgcggtgtttatg
aatacctgctctatccgcgacaatgcggagcagaagattctgaaccgtctggaattcttc
cattcgcttaagaagaagaaacgcggcttgatagtgggtgtgctgggctgtatggcagag
cgtgtgaaggacgacttaatcaccaaccatcatgtggacttggtggtgggaccggatgcc
tatcttactctgcccgaactgattgcctcggtagaggccggtgagaaagccatcaacgtg
gagctttccactacagagacctatcgggatgtcattccctcgcgcatctgcggaaaccac
atctccggcttcgtgtccattatgcgtggttgcaacaatttctgtacctactgcatcgtt
ccctacacccgtggccgcgagcgcagccgtgatgtggaaagcatcctcaatgaagtggcc
gacctcgtggcaaagggttacaaggaagttaccctgctgggacagaacgtcaattcctac
cgcttcgagaagccggacggagagacggttaccttcccaatgctgctgcgcaccgtggca
gaggcagcgccgggcgtacgtatccgtttcaccacctcgcaccctaaagacatgagcgac
gaaactctccaggtcatcgccgacatgcccaacgtatgcaagcacatccacctgccggtg
cagagtgggagcagccgcatcctgaagctgatgaaccgcaagtacgaccgcgagtggtat
atggaccgcgtggcagccatccgccgcatcatccccgattgtggcttgtctacggatata
ttctccggtttccatagtgagacggaggaggaccaccagctttccctctcgctgatggag
gagtgcggatacgattccgccttcatgttcaagtacagcgaacgccccggtacgcatgct
tccaagcacctgccggacgatgtgcccgaggaggtgaagattcgccgtttgaatgaaatc
atcgccttgcaaaaccgtctctctgccgaggcgaatgcccgttgcgtgggcaagacgtac
gaggtgctggtggaaggtgtttccaaacgcagccgcgaccagttgttcggccgtacagaa
cagaaccgtgtggtggtgtttgaccgtggcacgcaccgtgtgggcgattttgtgatggtg
aaggttaccgaatccagttcggctacgctgaaaggagaagaggtagccggctga
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