Bacteroides humanifaecis: JXR92_004530
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Entry
JXR92_004530 CDS
T08258
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum03030
DNA replication
bhum03410
Base excision repair
bhum03420
Nucleotide excision repair
bhum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JXR92_004530 (polA)
03410 Base excision repair
JXR92_004530 (polA)
03420 Nucleotide excision repair
JXR92_004530 (polA)
03440 Homologous recombination
JXR92_004530 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhum03032
]
JXR92_004530 (polA)
03400 DNA repair and recombination proteins [BR:
bhum03400
]
JXR92_004530 (polA)
Enzymes [BR:
bhum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JXR92_004530 (polA)
DNA replication proteins [BR:
bhum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JXR92_004530 (polA)
DNA repair and recombination proteins [BR:
bhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JXR92_004530 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JXR92_004530 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
UDB44933
LinkDB
All DBs
Position
complement(1148361..1151216)
Genome browser
AA seq
951 aa
AA seq
DB search
MNSIDKLFLLDAYALIYRAYYAFIKNPRTNSKGFNTSAILGFVNTLEEVLKKENPTHIGV
AFDPSGPTFRHEAYEQYKAQREETPETIRLSVPIIKDIIRAYRIPILEVAGYEADDVIGT
LATEAGRQGITTYMMTPDKDYGQLVSDRIFMYRPKHTGGFEVMGTEEVKAKFNIQTTEQV
IDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVETNREMI
TFSKFLATIKTDVPIRLDMNSLVREEPNEEELRKIFEELEFRTLIDRILKKGNGNSSSPT
PTSPTPDLFAGTLFAQPQTSNPENSAPVQGDLFANFAGEGTGASENSNLKRLEMLDVDYQ
LIDTEEKRKGIIQKLLTSEILSIDTETTGTEPMDAELVGMSFSDAENRAYYVPVPAEREE
ALKIVNEFRPLFENEKSMKVGQNIKYDMIILQNYGVRVKGKLFDTMLAHYVLQPELRHNM
DYLAEIYLHYQTIHIDELIGARGKNQKNMRDLPPEDVYRYACEDADVTLKLKNVLEKELK
EQGAEHLFYEIEMPLVPVLVNIESNGVLLDTEALKQSSQHFTVRLQEIEKEIYEMAGETF
NISSAKQVGEVLFDKLKIVEKAKKTKTGQYVTSEEVLQSYRSKHDIIGKILEYRGLKKLL
STYIDALPQLINPRTGRIHTSFNQAVTATGRLSSSNPNLQNIPIRDEDGKEIRKAFIPDT
DCEFFSADYSQIELRIMAHLSEDKNMIDAFLSGHDIHAATAAKIYKIDINDVTADMRRKA
KTANFGIIYGISVFGLAERMGVSRQEAKELIDGYFETYPQVKEYMDKSIQVARENGYVET
IFHRKRFLPDINSRNGVVRGYAERNAINAPIQGSAADIIKVAMAHIYQRFQAYNLKAKMI
LQVHDELNFSVPEAEKELVQKIVIEEMEQAYRMYVPLKADCGWGNNWLQAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaatcgataaactgtttttgctcgatgcctacgcactgatatatcgggcctat
tacgcgttcatcaagaacccgagaaccaactcaaaaggattcaacacctcggccattctg
ggctttgtaaacaccctggaagaagtgcttaaaaaagagaatcccacacacataggagta
gccttcgacccgtcaggccctaccttccgccacgaggcctacgagcaatacaaggcacag
cgcgaggagacacccgagaccatccgcctttccgtacctattataaaggatatcatccgc
gcctaccgcatccccatccttgaggtggccggctatgaagcggacgacgtgataggcacg
cttgccaccgaagcagggcggcagggcatcaccacctatatgatgacacccgacaaggac
tacggccagctggtatcggaccgcatctttatgtaccgccccaagcacaccggcggattc
gaagtgatgggtaccgaagaagtaaaagccaaattcaacatacaaaccaccgagcaagtc
atcgatatgctgggactgatgggcgatgcttccgacaacatccccggctgtccaggtgtg
ggcgagaaaaccgcacagaagctgattgccgaattcggcagcatcgagaacctgctggaa
cacaccgaccaactgaaaggcgcactgaaaacgaaggtggagacaaaccgggagatgatt
accttctccaaattccttgctaccatcaaaacagatgtccccatccggctcgatatgaat
tcgctcgtccgggaagaaccgaacgaagaagaactccgcaagattttcgaagagttggaa
ttccgcacactcatcgaccggatactcaaaaaaggaaacggcaactcttcctcccccacc
ccaacctctccgacacccgacctctttgccggcactctgtttgcccagccgcaaacctcc
aatcccgaaaacagcgcccccgttcaaggcgatttgtttgcaaattttgcgggcgagggg
acgggagcttctgaaaattcaaatctgaagcggttagaaatgctcgatgtagactatcaa
ctcattgatacagaagagaaaagaaagggaattattcaaaagttgcttacaagcgaaatt
ctctcaatagatacagagactaccggaaccgagccaatggatgccgaactcgtgggaatg
agcttcagtgacgccgaaaatcgggcatactacgtacccgtacctgctgaacgagaggaa
gccttaaaaattgtaaacgagttccgccccctcttcgaaaacgagaaatccatgaaggtg
ggacaaaatatcaagtacgatatgattatcctccagaattacggagtccgggtgaaaggc
aagcttttcgacaccatgctcgcccattacgtgcttcaacccgaactgcgacacaacatg
gactatctggcggaaatctacctgcactaccagaccatccacatcgatgagctgattgga
gcgcgaggcaaaaaccaaaagaacatgcgcgaccttccacccgaagatgtctaccgttat
gcctgcgaggatgcggacgtcaccctcaaactgaaaaacgtgctggaaaaggaactgaag
gagcaaggtgccgaacatctgttctacgaaatagagatgccgctcgtccccgtacttgtc
aatatagagagcaacggagtgctgctcgatacggaagcattgaagcagtcgtcccagcac
ttcactgtccgcctgcaggagattgaaaaggaaatctacgagatggctggcgagacattc
aatatcagctccgccaagcaggtaggcgaagtgctgttcgacaagctgaaaatcgtggag
aaagcgaaaaagaccaaaaccggacaatacgtcacctccgaagaggtgctgcaaagctac
cgcagcaagcacgacatcatcgggaagatactggaataccgcggactgaagaaactgctg
agcacctatatagatgccctgccccagctcatcaacccacgtacgggccgcatacacacc
tccttcaaccaggcggtaaccgctaccggacgcctcagctccagcaatcccaacctgcag
aacatccccatccgcgacgaagacggaaaggaaatccgcaaggcgttcatccccgacacc
gactgcgagttcttctctgccgactactcgcagatagagctgcgcatcatggcacacctc
agcgaagataagaacatgatagacgccttcctcagcggacacgacatccacgccgctacc
gctgccaagatatataagatagatataaacgacgtaaccgccgacatgcgccgcaaggca
aaaacggcaaacttcggcatcatctacggcatctccgtcttcgggcttgccgaacgcatg
ggcgtttcccgccaggaagccaaagagctgatagacggctactttgaaacctacccacaa
gtgaaggagtatatggacaaaagcatccaagtggcacgcgagaacggctatgtggaaacc
atcttccaccgcaagcgcttcttgccggacatcaactcaagaaacggggtggtacggggc
tatgccgaacggaatgccatcaacgctcccatccagggaagtgccgccgacatcataaaa
gtagccatggcacacatctatcagcgcttccaagcttacaatctgaaagcaaagatgatt
ttacaggtccatgacgaactaaatttcagcgttccagaggcagaaaaagagcttgtacag
aaaatcgtaatcgaagagatggagcaggcatatcgcatgtacgtacccctgaaagccgat
tgtgggtggggaaacaactggttgcaggcacactaa
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