Bacteroides humanifaecis: JXR92_006540
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Entry
JXR92_006540 CDS
T08258
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bhum
Bacteroides humanifaecis
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhum03400
]
JXR92_006540 (radA)
DNA repair and recombination proteins [BR:
bhum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JXR92_006540 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
Lon_C
DnaB_C
AAA_22
AAA_16
AAA_24
AAA
nSTAND3
AAA_14
AAA_5
Elong_Iki1
NTPase_1
AAA_29
zf-RING_10
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UDB45306
LinkDB
All DBs
Position
complement(1645778..1647145)
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AA seq
455 aa
AA seq
DB search
MAKEKTVYVCSNCGQDSPKWVGKCPSCGMWNTYVEEVVRKEVVNKRPVSGIETAKAKPVT
LHEIVADDEPRIDLHDAELNRVLGGGLVQGSLVLIGGEPGIGKSTLVLQTVLRIPEKRIL
YVSGEESTRQLKLRADRLTSTSSDCLIVCETSLEQIYVHIKNIRPDIVIIDSIQTISTET
LESSPGSIAQVRECSASILRFAKETHTAVILIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLNQDHEGMSGIAIASAIEG
IRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAGGL
KVNDPAIDLAVISSILSSNMDTAIEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLGFKR
FILPKYNMQGLNTKKIKMELIPVRKVEEAFRALFG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaaagacggtttatgtatgcagcaactgcggacaagactctcccaaatgg
gtaggcaagtgtccgtcgtgcggaatgtggaacacgtatgtggaagaggtggtacggaaa
gaagtggtgaacaagcgtcccgtatcgggcatagaaaccgccaaagccaaacccgtaacc
ctccatgagattgtagccgatgacgaaccgcgcatcgacctccatgatgccgagctgaac
cgggtactgggtggtggtcttgtacaaggttctcttgttttaattggcggcgaaccgggt
attgggaaatccaccctggtgctacagaccgtactccgcataccggaaaaacgtattctc
tatgtatccggcgaagaaagcacccgccaattgaaactgcgtgccgaccgcttgacaagc
acctccagtgactgcctcatcgtgtgcgaaacttccctggaacagatttacgtccacatc
aaaaatattcgcccggatatagtcatcatcgactccatacagacaatttctaccgaaacc
cttgaatcgtcgcctgggagcatcgcccaggtacgggaatgttccgcctccatcctgcgc
tttgccaaggaaacgcatacggcggtcatcctcatcgggcatatcaataaggaaggaagc
atagccggccccaaggtactggaacatatcgtggataccgtactccagttcgagggcgac
caacactacatgtaccgtatcctgcgcagcatcaagaaccgtttcggaagtactgccgaa
ctggggatttacgaaatgcggcaagatggattgcgccaggtgagcaacccatccgaactg
ctgctgaaccaggaccatgaaggtatgagcggcatagccatcgcctccgcgatagaaggc
atcagaccgttcctcatcgaaacgcaggcattggtcagcagtgccgtatatggtaacccg
caacgctctgccacagggttcgacatccgccgcatgaatatgctgctggccgtattggaa
aagcgtgtaggcttcaagctggcacagaaagacgtctttctcaacattgccggcggattg
aaagtgaacgacccggcaatagaccttgccgtcatcagttctatcctctccagcaacatg
gacacggccatagagccggaggtgtgcatggcgggagaaataggtctgtcaggtgaaatc
cgcccagtgaaccgcatagagcaacgtatcggagaagcagagaaacttggattcaagcga
ttcatacttcccaagtataatatgcaaggactgaacacgaagaagattaaaatggaattg
ataccggtacggaaggtggaagaagcattccgtgccctattcggataa
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