Bacteroides humanifaecis: JXR92_009280
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Entry
JXR92_009280 CDS
T08258
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JXR92_009280 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhum03400
]
JXR92_009280 (nfo)
Enzymes [BR:
bhum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JXR92_009280 (nfo)
DNA repair and recombination proteins [BR:
bhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JXR92_009280 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UDB42589
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All DBs
Position
2325177..2326019
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AA seq
280 aa
AA seq
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MKFIGAHVSASGGVEAAPVNASEIGANAFALFTKNQRQWVARPLTEESIRVFKENCGKLG
FDSRYILPHDSYLINLGHPEEEGLQKSRAAFLDEMQRCEQLGLKLLNFHPGSHLNKISVE
ECLDKVAESINLILGKTHDVVAVIENTAGQGSNVENEFWQLGHIIDRVDDKSRVGVCLDT
CHTYTAGYDIVNEYDKVFEEFDTAVGFGYLRGIHLNDSKKALGSRVDRHDSIGKGLIGMD
FFRRFMQDVRFDGIPIILETPDESLWAEEIKLLRSFVSSD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttataggtgcacatgtatcggccagtgggggagtggaagcggctcccgtcaat
gccagtgagataggggcaaatgcttttgccttgtttaccaagaaccagcgtcagtgggtg
gcaaggccgctgacggaggagagtatcagggtgtttaaggaaaattgcgggaagcttggc
ttcgattcccgctatatcctgcctcacgacagttatctgataaatttagggcatcccgaa
gaagaagggttacagaaaagccgtgccgcttttctggatgagatgcagcgctgcgaacaa
ttagggctgaagttactgaattttcatccgggcagccatctgaataagatttccgtggaa
gagtgtctggacaaggtcgctgaatccattaatcttatattgggcaagacgcacgatgtg
gtggctgtcatagagaacacagccgggcagggtagcaatgtggaaaacgagttctggcag
ctgggacatatcattgaccgggtggatgacaagtctcgcgttggagtttgccttgatacc
tgccacacgtatacagcaggctatgatatagtgaatgagtatgacaaggtgtttgaggag
tttgacacagcggtaggtttcggctatctgcgcggtatacacctgaatgactccaagaaa
gcactcggctccagagtagaccgtcacgacagcatcggcaaggggctgataggtatggat
ttcttccggcgctttatgcaagatgtgcgttttgacggtatacctattattttggagacg
cccgatgaatcgctttgggcagaggagataaaactgttgagaagctttgtctcctctgat
tga
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