Bacteroides humanifaecis: JXR92_013270
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Entry
JXR92_013270 CDS
T08258
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JXR92_013270 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bhum01007
]
JXR92_013270 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhum03016
]
JXR92_013270 (aspS)
03029 Mitochondrial biogenesis [BR:
bhum03029
]
JXR92_013270 (aspS)
Enzymes [BR:
bhum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JXR92_013270 (aspS)
Amino acid related enzymes [BR:
bhum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JXR92_013270 (aspS)
Transfer RNA biogenesis [BR:
bhum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JXR92_013270 (aspS)
Prokaryotic type
Other AARSs
JXR92_013270 (aspS)
Mitochondrial biogenesis [BR:
bhum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JXR92_013270 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UDB43329
LinkDB
All DBs
Position
3253190..3254947
Genome browser
AA seq
585 aa
AA seq
DB search
MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCE
RANRLGREFVIQVKGTVNERFSKNQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGGD
DIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFVV
PSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSF
VEQDDVINLFEGMAKYLFKEIRGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVELMD
IMKGHGFPVFDNAAYIGGICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVYARVEADGNV
KSSVDKFYTQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELRLEMGNQLGLRDKN
KFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRADAYDMVCNGIE
VGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGLAYGLDRWVSIF
AGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNLIVEVKE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtatagatcacacacctgcggagaactccgtatctccgatgttaacaagcaagtgacg
ctggcaggttgggtacagcgcagccgtaagatgggaggcatgactttcattgacctccgc
gaccgttacggaattacccaattagtgttcaacgaagaggtgaatgccgaactttgcgag
cgtgccaaccgcttgggccgtgaattcgtaatccaggttaaaggtaccgtcaacgaacgt
ttcagcaaaaaccaacatatcccgacgggagatattgaaatcatcgtatcggaactggat
gttctgaactcatcgctgacccctcccttcaccatcgaggaaaatacggacggtggcgac
gatatccgcatgaagtaccgttatctggacctgcgccgtgccaacgtacgcagcaatctg
gagcttcgtcataaaatgacaattgaagtacgcaaatacctggacagccagggattcatc
gaagtggaaactccgattctggtaggctccacacccgaaggtgcacgcgatttcgtcgtt
ccttcacgcatgaacccgggacaattctatgccttgcctcaaagcccgcagacactgaaa
cagttgttgatggtttccggtttcgaccgttacttccagatagccaaatgcttccgtgac
gaagacctgcgtgccgaccgccagccggaattcacacagattgactgcgaaatgtctttt
gtggagcaggatgacgtcatcaacctcttcgaaggcatggctaaatatctgttcaaggaa
atccgtggcgtagaaatgaacgagccgttcatgcgcatgccatgggcagacgccatgaag
tactacggcagtgacaagcccgacctccgtttcggcatgaagttcgtggaactgatggac
atcatgaagggacacggattcccggtattcgacaatgcagcttacatcggcggtatctgc
gcagaaggcgctgcacactatacacgcaaacagctggatgcactgaccgaattcgtgaaa
agaccgcaaatcggtgccaaaggtatggtatacgcgcgtgtggaggcagatggtaacgta
aaatcaagtgtcgacaagttctatacgcaggaagtattgcaggaaatgaaggctgctttc
aacgccaagccgggtgacttgattctgattctgagcggtgacgatgccatgaagacccgc
aagcaactgaacgagttgcgccttgaaatgggtaaccaactgggattacgcgacaagaac
aagttcgtctgcctttgggtggttgacttcccgatgtttgagtggagcgatgaagaaggc
cgcctgatggctatgcaccacccgttcactcatccgaaagacgaagatattcctttgctg
gatacagacccggcagctgtccgtgcagatgcatacgatatggtgtgcaacggtattgaa
gtgggtggaggttccatccgtatccacgatgcacagttgcaggccaaaatgttcgagatt
ctgggattcactccggagaaggctcaggagcagttcggcttcctgatgaatgccttcaaa
tacggtgcacctcctcacggtggtctggcatacggtctggaccgttgggtcagcatcttc
gcaggtctcgacagtatccgcgactgcattgcattccccaaaaacaacagtggacgcgat
gtaatgctggatgcaccttcagttattgaccagaagcagctggacgaactgaatctgatt
gttgaagtgaaagagtaa
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