Bacteroides parvus: JXR92_013355
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Entry
JXR92_013355 CDS
T08258
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bhum
Bacteroides parvus
Pathway
bhum03030
DNA replication
bhum03430
Mismatch repair
bhum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JXR92_013355 (holA)
03430 Mismatch repair
JXR92_013355 (holA)
03440 Homologous recombination
JXR92_013355 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhum03032
]
JXR92_013355 (holA)
03400 DNA repair and recombination proteins [BR:
bhum03400
]
JXR92_013355 (holA)
Enzymes [BR:
bhum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JXR92_013355 (holA)
DNA replication proteins [BR:
bhum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JXR92_013355 (holA)
DNA repair and recombination proteins [BR:
bhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JXR92_013355 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
POTRA_1
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UDB43345
LinkDB
All DBs
Position
3271984..3273003
Genome browser
AA seq
339 aa
AA seq
DB search
MAKQETTCDDILKKLRAKQYRPVYYLMGEESYYIDLISDYIVDNVLTDTEKEFNLTVVYG
ADVDIATVINAAKRYPMMSERQVVVVKEAQAIRNMEELSYYLQKPLNSTILVLCHKHGVL
DRRKKLVAEIEKVGVLFESKKVKDAQLPAFITSYMKRKGVDLDPKATSMLADFVGTDLSR
LTGELEKLIITLPKGQTRVTPEQIERNIGISKDYNNFELRSAIVEKDILKANKIIKYFEE
NPKTNPIQMTLSLLFGFFSNLMLAYYAPEKTEQGIASFIGLKTPWQSREYLSAMRRYSGV
KTMQIIGEIRYADAKSKGVGNSSLSDGDILRELVFKILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagaaacgacctgtgatgatattctaaaaaagttgagagccaaacaatac
cgccccgtctactatctcatgggcgaggaatcgtattacatagacctcatctccgactat
attgtagacaatgttctcactgacaccgaaaaggaatttaacctgaccgtagtctacggt
gcagatgtggatatagccactgtcatcaatgcggccaagcgctatccgatgatgtccgaa
cgccaggtcgtagtcgtaaaggaagcgcaggccatccgcaacatggaagagctttcatac
tacctgcaaaagccgttgaactccaccattcttgttctatgccacaaacatggggtgctg
gacagaagaaaaaagctggtggccgaaatagagaaggtgggggttctatttgaatccaag
aaggtaaaggatgcccagttaccggcattcatcacctcatacatgaagcgcaaaggtgta
gatttggatcccaaagctacctccatgcttgccgatttcgtaggtacggacctcagccgc
cttacgggagaactggaaaaactgattataactcttccaaaaggtcagacacgcgtcacc
cccgaacagatagaacgcaacatcggaatcagcaaagattataataactttgaacttcgc
agtgccatcgtagaaaaagacatactaaaggccaataaaataataaaatattttgaagaa
aatccgaaaacgaatcctatccagatgactttatctttacttttcggcttcttctccaac
ttaatgttggcttactatgcgcccgaaaagacggagcagggtattgccagtttcatagga
ttaaagactccctggcagtcgcgcgaatacctaagtgccatgcgtcgttacagcggagta
aagaccatgcagataatcggggagattcgatatgcagatgccaaatccaaaggagtagga
aattcctccctaagcgatggagatatcctccgggaattggtctttaagattctacattaa
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