Bacteroides humanifaecis: JXR92_014610
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Entry
JXR92_014610 CDS
T08258
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JXR92_014610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhum03021
]
JXR92_014610
Transcription machinery [BR:
bhum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JXR92_014610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-ProteinID:
UDB43578
LinkDB
All DBs
Position
complement(3586953..3587813)
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AA seq
286 aa
AA seq
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MRQLKITKSITNRESASLDKYLQEIGREDLITVEEEVELAQRIRKGDRVALEKLTRANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNQVGSLNKISKAFSKFEQENERRPSPEELADELEIPVDKISDTLKVSGRHI
SVDAPFVEGEDNSLLDVLVNDDSPMADRSLVNESLAREIDRALSTLTDREKEIIQMFFGI
GQQEMTLEEIGDKFGLTRERVRQIKEKAIRRLRQSNRSKLLKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattacaaaaagtatcactaacagagagagcgcttctcttgacaag
tatttgcaggaaatcggtcgcgaagacctcattactgttgaagaggaagtggagctcgct
cagcgcatccgcaagggtgaccgtgttgcactggagaaattgacacgtgccaatctgcgt
ttcgttgtatctgtggccaagcagtaccaaaaccaaggtttgagtttgcccgacttgatt
aatgagggtaatttaggactgatcaaggctgccgaaaagttcgatgaaacacgtggtttc
aagttcatcagttatgcagtatggtggatacgtcagtccattctgcaggctttggcagag
cagtcgcgtattgtacgtcttccgttgaaccaggtaggttcgctgaataaaatcagcaag
gccttctccaagttcgagcaggaaaacgaacgtcgtccgtctcctgaagagcttgccgat
gaactggaaatccctgttgacaaaatctctgatacgctgaaggtgtccggccgtcacatt
tcggtggacgcaccttttgtagaaggagaggacaacagcttgctcgatgtgttggtcaac
gatgactcccctatggctgaccgctctttggtgaacgagtctcttgcgagggaaattgat
agagctctttctacgttaaccgatagggaaaaagaaatcatacagatgtttttcggtatc
ggacagcaggaaatgacattagaggaaatcggcgacaaattcggcttgacccgtgagcgt
gtgcgtcagattaaggaaaaagcaatcagaagattaagacaaagtaatcgtagtaaattg
ctcaaatcttatttgggataa
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