Bacteroides humanifaecis: JXR92_016870
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Entry
JXR92_016870 CDS
T08258
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bhum
Bacteroides humanifaecis
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhum02000
]
JXR92_016870
Transporters [BR:
bhum02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JXR92_016870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
DUF7292
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UDB43993
LinkDB
All DBs
Position
complement(4101757..4103319)
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AA seq
520 aa
AA seq
DB search
MNKILKVLALGAMALSTTACSDFLEVNPRTQVSETEFYKTEDDMMKGLYAVMNEMQTRMP
EVWSYSSLLGDESETGGGIGEGSYKTKWDTFTYDATSCFGAWGYGSWWNEWDFGLFNGVI
AANLLIDKLAGCNLSADFVNSISAEARFYRAIFYYHLFMGYEQFPLIKHYLAASEMYSVA
KGTREEIYEFMMGDLDDEVTKYLPQRSATQQGRVCRDAAKLLRAKIILFHRDETKYQVAL
NDMKEIITSGRYQLNPDYQSLWVKDGEWCAESIFEVCYAGNNSGEGFGLARSLGGRNIVD
PRSAEQGGLGEGYGQNTMPSTVYNMFKEGDTRREGTVIVYADEAKKVAEMVAKGELPAGS
AFQVSDQQENYEGLGHYKIHPRKETTSTVNPTDNYYNSWRIYRYADVLLLAVELDVRING
TASADAQGWFDQVRDRAFKDKEHRINLAGKSKQELLDILFEERGYEFMDEMQRWFDILRF
DKGTEILGNKGWTEKFRYFPIDQSEMDRAKGGLTQNPGWL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatattaaaggtattggctttgggtgcgatggctttgtcgaccacagcttgt
tcagattttctggaagtgaatccgagaactcaggtgtcagaaaccgaattctataagacg
gaagacgatatgatgaagggcttgtatgccgtgatgaatgaaatgcagacccgtatgccg
gaggtttggtcttactcttctttgctgggtgatgagtccgaaaccggtggtggtatcggt
gaggggtcttacaagacgaaatgggatacttttacctatgacgcgacttcttgtttcggt
gcatggggatatggttcttggtggaatgagtgggattttggcttgttcaatggagtcatt
gctgccaatctgttgattgacaaattggccggatgcaacctcagtgcagactttgtcaat
tccatttctgccgaagcgcgcttttaccgtgccattttctattaccatctgtttatgggg
tatgagcaattcccgcttatcaaacattatctggcagccagtgaaatgtatagcgttgcc
aaaggaacccgtgaagaaatttatgagtttatgatgggtgacttggatgacgaagtgact
aagtatctgccccagcgcagtgctacacagcagggacgcgtttgccgggatgctgccaag
ctgcttcgtgccaaaattattttgttccatcgtgatgagactaaatatcaggtggcattg
aatgacatgaaagaaataatcaccagtggaagataccagttgaaccctgattatcaaagc
ttatgggtgaaagacggagaatggtgtgcggaatctatctttgaggtatgttatgccggc
aataactccggtgaagggtttgggcttgcacgttctttgggcggtcgtaacattgttgac
ccgagaagtgccgagcagggcggcttgggcgaaggttatgggcagaataccatgccgagt
actgtttacaacatgtttaaggaaggtgatacgcgccgtgagggaacagtcattgtctat
gcggacgaggctaaaaaagtggcagaaatggtggccaaaggtgaactaccggcaggaagt
gctttccaagtcagtgaccagcaggaaaattacgagggtctggggcactataagattcat
ccgagaaaggagacgacgtctacggtgaatcctacggataactattataactcttggcgt
atttaccgttatgccgatgttttgctgctggctgtggagcttgatgtacgtatcaacgga
actgccagtgctgatgcgcaaggttggttcgaccaggtcagagaccgcgctttcaaagac
aaagagcatcgtatcaacttggcgggaaagagcaagcaggagttgttggatattcttttt
gaagagcgtgggtatgagtttatggatgaaatgcagcgttggtttgatattctgcgtttc
gataaaggaacagagattttaggtaacaaaggttggacggagaagttcagatacttccca
attgaccagtcggaaatggatagggctaaaggtggcttgacacagaaccctggctggtta
taa
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