Bacteroides humanifaecis: JXR92_016920
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Entry
JXR92_016920 CDS
T08258
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum00521
Streptomycin biosynthesis
bhum00523
Polyketide sugar unit biosynthesis
bhum00525
Acarbose and validamycin biosynthesis
bhum00541
Biosynthesis of various nucleotide sugars
bhum01100
Metabolic pathways
bhum01110
Biosynthesis of secondary metabolites
bhum01250
Biosynthesis of nucleotide sugars
Module
bhum_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JXR92_016920 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JXR92_016920 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JXR92_016920 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JXR92_016920 (rfbB)
00525 Acarbose and validamycin biosynthesis
JXR92_016920 (rfbB)
Enzymes [BR:
bhum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JXR92_016920 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
UDB44002
LinkDB
All DBs
Position
complement(4120715..4121857)
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AA seq
380 aa
AA seq
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MKTYLVTGAAGFIGANYIKYILAKHNDIKVVILDALTYAGNLGTIANDIDDERCFFVKGD
ICDRVLADELFAKYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRTWVTG
KDESGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADMVVMAYH
DTYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKNLPVYGDGSNVRDWLYVEDHCKA
IDLVVREGVEGEVYNVGGHNEKTNLEIVKLTIATVRRLMEEEPRYRAVLKKQVKAADGTI
DISWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQPWV
EEVTSGDYQKYYEQMYGGRG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttatctcgtaaccggtgccgccggttttatcggcgccaactatattaaatac
atcctggcaaaacataatgatattaaagtggtgatactggatgccttgacctacgcaggc
aatctgggcaccattgccaatgacattgacgatgaacgttgcttttttgtaaaaggtgac
atctgcgaccgcgtgcttgccgacgaactgtttgccaagtataaattcgattacgtagtg
aattttgctgccgagagccacgtagaccgtagcatagagaatccccagcttttcctgatg
accaacatcctgggtacacaaaacctgctcgatgccgcccgccgtacctgggtcacgggt
aaggacgagtccggttatcccacttggcgcaaaggcgttcgttaccatcaagtgtctacc
gacgaagtttacggctcacttggtgccgaaggctacttcacggagcaaaccccgctctgc
ccgcacagcccttacagcgccagcaagacgagtgccgatatggtagtgatggcctatcac
gatacctataagatgcccgtcactatcacccgctgttccaacaactacggtccttatcac
ttccccgaaaagctgattccgcttatcatcaagaatattctcgaaggcaagaacctcccc
gtctatggcgacggcagcaacgtgcgtgactggctctacgtggaagaccactgcaaagct
atcgacctggttgtccgcgagggtgtggaaggcgaagtctacaacgtaggcggtcacaac
gaaaagaccaatcttgaaatcgtgaagctgactattgccaccgtccgccgcttgatggag
gaagaaccccgttaccgtgcagtgctgaagaaacaagtaaaagccgccgacggcacgatt
gacatcagctggataaacgaagaccttatcaccttcgtcaaagaccgcctaggtcacgac
cagcgttatgccatcgaccccacaaagattaccaatgccctgggctggtatccggagacg
aagttcgaggtcggcatcgtcaagaccattgaatggtacctgaacaaccagccgtgggtg
gaagaagtgaccagcggtgattatcagaagtattacgaacagatgtatggaggtagaggt
taa
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