Bacteroides humanifaecis: JXR92_016935
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Entry
JXR92_016935 CDS
T08258
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bhum
Bacteroides humanifaecis
Pathway
bhum00190
Oxidative phosphorylation
bhum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhum00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JXR92_016935
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JXR92_016935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhum03019
]
JXR92_016935
Enzymes [BR:
bhum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JXR92_016935
Messenger RNA biogenesis [BR:
bhum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JXR92_016935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
SWM_repeat
Motif
Other DBs
NCBI-ProteinID:
UDB44005
LinkDB
All DBs
Position
4123768..4125828
Genome browser
AA seq
686 aa
AA seq
DB search
MDNRYFKRDISWLSFNYRVLLEAEDETLPLYERINFISIYSSNLEEFYKIRVADHKAIAT
GASQSDEETMQSAAELVDEINQEVNRQLEERIRIYEQKILPALRKHHIIFYQSRNVEPFH
RDFVRSFFREEIFPYLAPVPVSKDKVISFLRDNRLYLAVRLHLKGAPASSPNRIQYFVMK
LPYSKVPRFIQLPKVGKDYYLMFIEDIIKANLDTIFPGYEVDSSYCIKISRDADILIDDA
ANTSEIIEQVKKKVKKRKIGAVCRFVYDRAMPQDFLDFLVDAYRIDRRELVPGDKHLNME
DLRHLPNPNQSVRPIKKPQPMKLTCLDERESIFRYVEKKDLLLHYPYHSFDHFIHFLYEA
VHEPTVREIMVTQYRVAENSTVINTLIAAAQNGKKVTVFVELKARFDEENNLATAEMMKA
AGINIIFSIPGLKVHAKVALVLRRDKEGRKLTSYAYISTGNFNEKTATLYADSGLFTCNP
VIVNDLHNLFRTLQGKENPVFHRLLVARFNLIPELNRLINHEIELTRQGKQGRIILKMNA
LQDPAMIDRLYEASQAGVEIDLIVRGICCLIPGQEYSHNIRVTRIVDTFLEHARVWYFGN
GGAPKLFLGSPDWMRRNLYRRIEAVTPILDPDLKQELIDMLSIQLSDKRKACFVDDRLRN
RWKSSRPQKEKVRSQYSFYEYLREKI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagatatttcaaacgtgacatcagctggctttccttcaactaccgcgtactg
ctggaagcggaagacgagacattgccgctatacgaacgcatcaactttatttctatatac
tcttccaatctggaagaattctacaagatacgcgtagccgaccataaggccatagccacc
ggagcctcgcaaagcgatgaagagactatgcagtctgccgccgaactggtagatgaaatc
aaccaagaagtcaatcgccaactggaggaacgtatccgcatctacgaacagaagatactg
cccgccctgcggaaacatcacatcatattttatcaaagccgcaacgtagaaccgtttcac
cgcgactttgtgcgcagcttcttccgcgaagagatattcccctatctggccccggtgccc
gtaagcaaggacaaggtgatttcattcctgcgcgacaaccgtctctatctagccgtacgg
cttcatctgaaaggagctcccgccagttctccaaaccgcatccagtatttcgtgatgaaa
ctgccgtacagcaaagtgccgcgcttcatccagctgcccaaggtggggaaagactattat
ctgatgttcattgaagacatcatcaaggccaatctggataccatcttccccggttatgaa
gtggacagcagttattgcatcaagatttcacgcgatgcggatattctgatagacgatgcc
gccaatacctccgaaatcatcgagcaggtgaagaagaaggtaaagaaacgcaagataggc
gccgtgtgccgttttgtatacgaccgcgccatgccccaggacttcctcgactttctggta
gatgcctaccgcatagaccgccgggagctggtgccgggagacaagcacctcaacatggag
gatttgcggcatctgcctaatcccaaccaaagcgtacgtcccatcaagaaaccccagccc
atgaagctgacctgcctggacgaacgcgaatccatcttccgctatgtggagaagaaggac
ctgctgctgcattatccctaccactccttcgaccacttcatccattttctatatgaagcc
gtccacgaacccaccgtgcgtgaaatcatggtgacccagtatcgcgtggcagagaactcc
accgtcatcaacaccctaatagccgccgcacagaacggaaagaaagtcaccgtctttgtg
gaactgaaagcccgcttcgacgaagaaaacaacctcgccaccgccgagatgatgaaagcc
gccggcatcaacatcattttcagcataccaggactaaaggtacatgccaaagtagccctc
gtgctacgccgcgacaaggaagggcgcaaactgacaagctacgcctacatcagcaccggc
aacttcaacgaaaagaccgccaccctctatgcggacagcggactattcacctgcaacccg
gtgattgtaaacgacctgcacaacttgttccgtactctgcagggaaaggaaaatccagtg
ttccaccgcctgcttgtggcccgcttcaacctgattcctgaactgaaccgcctcatcaat
cacgaaatagaactgacccggcaaggcaagcaaggacggattatcctaaaaatgaatgcc
ctgcaagaccccgccatgatagaccgcctctacgaagcctcgcaagccggtgtagagata
gacctcattgtccgcggcatctgctgcctcatccccgggcaggagtacagccacaacatc
cgcgtgacacgcatcgtggatacctttctggaacatgcccgtgtgtggtacttcggcaac
ggcggcgcacccaagctcttcctcggctcgccggactggatgcggcgtaacttgtaccgc
cgtatcgaagccgtcacccccattctggacccggacttgaagcaagagctcatcgatatg
ctatccatacaactgtcggacaaacggaaagcctgctttgtggacgaccggttgcgaaac
cgctggaagtcgtcgcgaccgcaaaaggagaaggtacggtcgcaatatagcttttacgaa
tacttgagagagaaaatataa
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