KEGG   Bombus huntii (Hunt bumble bee): 126863949
Entry
126863949         CDS       T10446                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
bhun  Bombus huntii (Hunt bumble bee)
Pathway
bhun03030  DNA replication
bhun03410  Base excision repair
bhun03420  Nucleotide excision repair
bhun03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bhun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126863949
   03410 Base excision repair
    126863949
   03420 Nucleotide excision repair
    126863949
   03430 Mismatch repair
    126863949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhun03032]
    126863949
   03036 Chromosome and associated proteins [BR:bhun03036]
    126863949
   03400 DNA repair and recombination proteins [BR:bhun03400]
    126863949
DNA replication proteins [BR:bhun03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126863949
  DNA Replication Termination Factors
   ELG1-RFC complex
    126863949
Chromosome and associated proteins [BR:bhun03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126863949
DNA repair and recombination proteins [BR:bhun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126863949
  Check point factors
   HRAD17(Rad24)-RFC complex
    126863949
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_24 AAA_22 AAA_11 Mg_chelatase Rad17 AAA_30 bpMoxR AAA_assoc_2 DUF815 AAA_14 ResIII MCM ATPase_2 AAA_5 AAA_19 SLFN-g3_helicase RuvB_N DNAX_ATPase_lid AAA_7 AAA_28 EAL
Other DBs
NCBI-GeneID: 126863949
NCBI-ProteinID: XP_050470680
LinkDB
Position
3:1317457..1319449
AA seq 357 aa
MQAFLKTGKLGPGEPKKTSTSRSKEEHSGSVTPWVEKYRPRTVEDVVEQAEVVEVLRQCL
TGGDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKERLLELNASDERGIQVVRDKIKSFA
QLTAGGMRDDGKSCPPFKIIILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIVERLEYICKEEDLKATKPVLLKIVEASGGDLRRAITCLQS
ITRLKGKGINITVDDIIEIIGIVPDKWLDDLMNVCKTKDYSKAEEFIDQFMLEAYATSQV
IEQLSEKIIYSNELTDKQKTLIADRLGECNYRLLDGGSEYIQLVNLCCGIIKAYELV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaactggcaaattagggcctggtgagcctaaaaaaacttcaact
tcacgttcgaaggaagaacatagtggttctgtaacgccatgggttgagaaataccgacca
agaactgtagaagacgttgttgaacaagcagaagtagtagaggtattgcgacaatgttta
acaggtggagattttccaaatctactattttatggcccacctggtactggtaaaacaagt
actatattagccgcggctagacaattatttggtagcctttacaaagaaagactattggaa
ttaaatgcttctgatgaaagaggtatccaagttgtaagagataaaatcaaatcttttgca
caacttacagcaggtggtatgagagatgatgggaaaagttgtccaccttttaaaattatt
atcttagacgaggcagatagtatgactaatgctgcacaagctgcacttcgtcgtactatg
gaaaaagaatctcatagtacccggttttgtttaatttgtaactatgtatcgagaatcata
gaacctttgacttctcgttgtacaaaattcagatttaaaccattgggagaagataaaatt
gttgaaagattagaatatatatgtaaagaggaggacttgaaggcaacgaagcctgtccta
ctaaaaattgtcgaagcctcgggtggagatttacgacgcgctataacgtgtttgcagtcc
attacaaggttgaaaggcaaaggcatcaatattactgttgatgatatcattgaaattatt
gggattgtacctgataaatggttggatgatttaatgaatgtatgcaagacaaaagattat
agcaaggcagaggaatttattgatcaatttatgttagaagcatatgctacatctcaagtt
attgagcagctcagtgaaaaaattatatattccaatgaattaacagataagcagaaaact
ctcattgcagatagactgggggaatgtaattataggttgctagatggtggaagtgaatat
atacaacttgtaaatctttgttgcggtattataaaagcttatgaattagtataa

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