Bombus huntii (Hunt bumble bee): 126863970
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Entry
126863970 CDS
T10446
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03013
Nucleocytoplasmic transport
bhun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126863970
09122 Translation
03013 Nucleocytoplasmic transport
126863970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126863970
03041 Spliceosome [BR:
bhun03041
]
126863970
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126863970
Spliceosome [BR:
bhun03041
]
Complex C
Other components
EJC/TREX
126863970
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126863970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
126863970
NCBI-ProteinID:
XP_050470731
LinkDB
All DBs
Position
3:complement(16256538..16261379)
Genome browser
AA seq
664 aa
AA seq
DB search
MAMFEVLRKEYSDYLQQCFKLSDIQIFQKKCVERCTNDSDRKAAIDQALRDTLLVILSEN
LSSNVPLLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVVVWK
EDLFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGSEKSEGDDLEQITKDDDKSETKVPIDYNLYRKFWALQDFFRNPNQLYLKMHWKI
FSTHASSVLSAFSSFKLEEQRNYPSTCVKVESSMEGSHKETPYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKGTTEQVYALLT
ETPPDGPTFAETVKNILKREEHWNAWKNEGCPPFKRPTPDSSADIEESKKPKRPRRRIGD
VIRDAQAVGKYHMGNPELTKLWNLCPNNLEACKSKERDFLPSLETYFEEAIMQLDPNAMV
EDEYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDI
KLETEETPPPEANDQEFNEDVLKQESEQVEAENTDTKGRKLTKVTPDMVAKLSEILKNDW
KKLATKFGYTSEEITFFQGKPTPYEQCKNMLEIWAEEDVDASMENLAYILEGLKFTEALA
VLKS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttcgaagttttaagaaaagaatatagtgattatttgcaacagtgttttaag
ctgtcagatatacaaatatttcaaaagaaatgcgtcgaacggtgtacaaatgatagtgat
agaaaagctgcaattgatcaagcattaagagatactcttcttgtaatattatctgaaaat
ctatcaagtaatgtgcctctgcttgagacttacattacattctgcattgaattatgcaga
aaagacttagcaactgcaagtatgccagtgatgctacttggtgatatatttgattctatg
acactcgacagatgcgaacagttgtttacttttgttgagaacaatgtggttgtgtggaag
gaagatttattctttagtgcctgtaaaaacaatttgttaaggatgtgcaatgacttactt
agaaggttatctagatcacaacaaactgtattttgtggaagaattcttttatttctggct
aagttttttcctttttctgagaggtctggtcttaatattgttagtgaatttaatttggag
aatcatacagaatttggctctgaaaaatcagagggagacgatttggaacaaataactaag
gatgatgataaatcagagactaaagtaccaattgattataatttatatagaaaattttgg
gcacttcaagattttttcagaaatcccaatcaattatacctaaaaatgcactggaagata
ttttcaacgcatgcttcaagtgtactgtctgcattttcatcttttaaattggaagaacaa
cgtaattatccttcaacatgtgttaaagttgaatcttccatggagggatctcacaaggaa
accccttattttgcaaaatatttaacaaatcaaaaattgttggagctacaactatctgat
tcaaatttcagacgatatgtattgctgcaatttctcattcttttccaatatcttaatagc
actgttaaatttaaagccttccttgccagtggctatgagacaagtgaaacacatgaacta
aagcctgatcaagtagaatgggtaaaaggaaccacagagcaagtatatgccttactgaca
gaaacacctcccgatggtccaacatttgcagaaactgttaaaaatatattgaaacgcgaa
gagcactggaatgcttggaaaaatgaaggatgcccaccatttaaaagaccaactccagat
tctagcgccgacatagaggaatcaaaaaaaccaaagagaccaaggcgtagaattggagat
gtcattagagacgctcaagcagtaggaaagtaccatatgggaaacccagaactcacgaaa
ttatggaacttatgccccaataatcttgaagcatgtaaatctaaagaaagagacttcctt
ccatctttagagacatattttgaagaagctattatgcaattagatcctaatgcaatggta
gaagatgaatacaagaaagtaaatgatgggaattttggttggcgagcattgagattacta
gctagacgtagtcctcatttttttgtccatgggaattatcctattaataaattacctgaa
tatctcgaaacaatgattaaaaaaatcgctaaagataggccacagacacagtcggatata
aaattagaaacagaggaaactccaccgccagaagcgaacgatcaagaatttaacgaagat
gttctcaagcaagagagtgaacaagttgaagccgaaaatacggatacgaaaggacgaaaa
ttgacgaaagtgacacctgatatggtggcgaaattatcagaaattctgaaaaacgattgg
aaaaagttagcaaccaagtttggttacacgagtgaagagattacattttttcaagggaaa
ccaacgccgtacgagcaatgtaaaaatatgttggaaatttgggcggaagaagatgtagat
gcatcgatggaaaatttagcatatattttagaaggtttaaaattcacggaagcgcttgct
gttttaaaatcctaa
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