Bombus huntii (Hunt bumble bee): 126864100
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Entry
126864100 CDS
T10446
Name
(RefSeq) nuclear pore complex protein DDB_G0274915-like isoform X1
KO
K18716
nucleoporin NUP42
Organism
bhun Bombus huntii (Hunt bumble bee)
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126864100
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126864100
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
126864100
NCBI-ProteinID:
XP_050471010
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Position
3:3386669..3389282
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AA seq
626 aa
AA seq
DB search
MVVCKYYRQGNCRFGQYCQFEHINTFGGNNKVDSYNEDEYIAVLVAKEMLNAERGRQWLL
SCFAPFKDKPCIPGMEDLSPEEVRWEMYQAQNNGMVDQAKLHFQQLCTDMKAKREAFKNP
TRETLTKLKEILGTGHKNARNDNTSGKSSSFAFATPQLGLPSSTPSSNVFGNKTFGTQSN
PFSGGFPPTSNTSIFGRTPTTSNSVFGSTPTFGSNLGVFGGGTSTNTVFGGITNTSTFNA
GQNTQTFGSSGSIFGGGASQPVFGQPSIFGTSNPVNNVFARHETSQAPISVFNSGATSSP
SLFSGTSSQSNASVFAGAKTSTANPFGGSSNLQTTNSIFGSTPSTGTFSSGIFSQSETPA
FGGAPVFGASATFGNNPSSIFGEKPAFGNSGSIFGGSSTTTPAFSSAQPTTAFGVTTSTS
SVNLFGNAQGTTPSMATSSASPFSATPSTTTSPFATATSQFETTSTAAFSKPTFGMATET
AGETFATTATSSSTPFGTTNTGVTFGTPSTTTSPFTSTIFSDITSSPFSPTSVTSTATTT
NSFTPQQQQITSPFGTFARNQTSSTATSTHEPFGKSTFGVTLTAIVIDDNIYSLDNQLTD
DEKNMYMAEKFIFGKIPLKPPTKDIR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaatactatcgacaaggaaattgtcgatttggacaatattgtcaattc
gaacatataaatacttttggaggtaataacaaagttgactcttacaatgaggatgaatat
attgcggtgttggttgcaaaagaaatgctcaatgcagaaagaggaagacaatggttacta
tcgtgttttgcaccatttaaggacaaaccgtgtattcctggcatggaagatttgtctccg
gaagaagttcgatgggagatgtaccaagctcaaaataatgggatggtagatcaggcaaaa
ttacatttccaacaactgtgtacagatatgaaggcaaaaagagaagctttcaagaatcct
acccgcgaaacactaactaagcttaaagagattctaggtacaggacacaagaatgccagg
aatgataatacatctgggaaatcctctagttttgcttttgcaactcctcaacttggactt
ccaagcagtactccatcctccaatgtatttggaaacaagacatttggaactcagagcaat
ccattcagcggtggtttcccgcccaccagcaatacatcaatctttgggagaacacctaca
acttcaaattctgtatttggtagtacaccaacttttggcagtaatttaggagtgtttggt
ggtggtaccagcactaatactgtatttggtgggattacaaacacttctacatttaatgca
ggacaaaacacgcagacttttggatcgtctggctcgatttttggcggtggagcttcccaa
cccgttttcgggcagcctagcatatttggaaccagcaatccagtgaacaatgttttcgcc
aggcatgaaacgtcccaggcgcccatatcagtattcaatagcggagcaacatcttctccc
tctttattcagtggaacttcttctcaatctaacgcttctgtatttgccggagctaaaact
tctactgctaatccgtttggcggctcttcaaatttacagacaactaactccatcttcgga
tcgactccgtctaccggaaccttcagttcaggcatattctcgcagtctgaaacacctgca
tttgggggagcaccagtatttggtgcttcagcaacttttggaaacaatcccagttcgata
tttggcgagaaaccggcatttggaaattctggtagtattttcggcgggtccagtaccaca
acacctgccttcagttcggcacagcctacaaccgcttttggcgttaccacttctacatct
tccgtaaatctatttggaaatgctcagggtaccacaccctctatggccacttccagtgct
tcgccatttagcgcaacaccttcaacgactacgagtcctttcgctaccgcaacctcgcaa
tttgaaaccaccagtacggcagccttctcgaagcctacgtttgggatggctacggaaact
gcgggtgaaacttttgctactacagctacttcctctagcactccgtttggtactacaaat
accggagttacttttggtacacctagtaccaccacttctcctttcacatcgacgatattt
agcgatataacgagctcaccatttagtcctacgagcgttacatctacagctacaaccaca
aattcgtttacaccccagcaacaacaaattacttctccatttggtacttttgcacgaaat
caaacttctagtactgctacgtctacgcacgaaccgtttggaaaatcgacattcggagta
acgctgacggcaatcgttattgacgacaatatttattcgttagacaatcaactaacagac
gacgagaagaacatgtacatggcggagaaatttatttttggaaagattccgctgaaaccg
cctaccaaagacattagataa
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