Bombus huntii (Hunt bumble bee): 126864211
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Entry
126864211 CDS
T10446
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bhun Bombus huntii (Hunt bumble bee)
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhun03021
]
126864211
03036 Chromosome and associated proteins [BR:
bhun03036
]
126864211
Transcription machinery [BR:
bhun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126864211
Chromosome and associated proteins [BR:
bhun03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126864211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Spt6_S1
S1_RRP5
Tex_central_region
OB_RRP5_4th
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
126864211
NCBI-ProteinID:
XP_050471254
LinkDB
All DBs
Position
3:complement(8589750..8597539)
Genome browser
AA seq
1734 aa
AA seq
DB search
MADYLDIEAQESEEEDQLDVKEKKKLKKLKEMEDSEDEDDDEEDEGEVPGLIDDNSIDDD
SDGEDSDNSRKRKKSDDEDFDDRLEDDDYDLIEENLGVKVERKRRFKRLRRIQDEESEVE
EEREINDERDAIANELFQGSGDEDEERSEVSHRGEVEGYSEEESDDEDDFIVDGDGIPIT
EKRKKKRPVFSDAALQEAQDIFGIDFDYDEFGKYGEDAFEEEDEDEYIHGEIGNRPRPSK
KHLKRKSTRKSIFEVYEPSELIRGHFTDIDNEIRTTDIPERMQLRAVPIIPTVEGSDELD
LEAKWIYKQAFCQPTISIQDSHLNEEAKERAKKGPQTIGKIKKALDFMRNQNFEVPFIAF
YRKEYVLPELNINDLWKIYKFDVKWCYLKQRKENLLKLFEKMRNFQLDEIMKNPDAPLPD
NIRVIKDDDIERLKNAHTFEELNDIYRHFMLYYNQDVSSMQEIAHKKEKQAQRKAKLEKR
KQRLAEAEENGDLSEIPDAEDEEEEIDESLKQPVRKGPYYICRKAGLDGFTKRFGLSPEH
FAENLRDNYQRHEVDQDPIEPAIVANEFCSAIFTTSDEVVKAAQLMVAIQLAHEPLVRKC
VREMYMERAKVSVKPTKKGIKEIDEGHAIYGLKYLKNKPVRDLVGDQFLKLIVAEEDKLI
TLFFSDMIEGNTSNNYINEIKQLYYRDEFSKSVQDWNALRTGSVEIALNRIIIPQLKKEL
RSNLLLEAKECVMKACCRKMYNWIKIAPYTCEFPDEDDEDWNTSKGIRVMGLAYVPDPSQ
AAFTCIISPEGECTDYLRLPHLLKRKNSFRENEKILKEVDLLGIKNFIATKKPHVVVVSG
ESREALMIVSDIKECIVNLAEEEQFPTIPVEICDNELTKVYANSNRGISEFRDYPEVLRQ
AISLARKIQDPLLEFSQLCTIDEEILCLKYHPLQNQLPKDDLIENLYLEFINRINEVGVD
LNKAVQQPYTANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITACHMGPKVFVNCA
GFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPAGALEEILE
SPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRVPYQSLNTEKLFDILT
KETPETFYVGKLVLATVVGISHRRPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEV
WNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDKHVANPEERVRVGQVIHCRIIKIEV
ERFSVECTSKTSDLIDKNHEWRPQRDVYYETEAEEKDTKTEEDAKKLQQRQTYVKRVIIH
PSFHNISFAEAEKLMLTVKQGEAIIRPSSKGSDHLTVTWKVTENIYQHIDIREEGKENTF
SLGRSLWIGNEEFEDLDEIIARHINPMAAYTSELLDFKYYKTSVEGIKDKAEEILKEQKK
QNPGGIPYIVSAAKNYPGKFLLSYLPRIRCRHEYVTVIPDGFRFRGQMFSRINDLFRWFK
EHFRDPIPGQATPGTPHGTMTSRTPYNGTPGLNGVNPDTIQRVAQNMPHHLLHSLSKVAN
QTPHHYPPYTPGAASVNNYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTPNHSQGPFL
QPIPPVMNSNSHRTARSHRSVSSTSDATNWTKAAEAWARSKQSSKEFNTTPRYNESRKTP
RNQEAQNGRATPRNRTPSARTPSYKSPRETPFTNSSPRSMSLSGDGTPLYDESW
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggacattgaagcacaagaaagtgaggaggaggaccaacttgatgtt
aaagaaaagaaaaaacttaaaaaattaaaagagatggaggacagtgaggatgaagatgat
gatgaagaagatgaaggagaagttccaggacttattgatgataattctatcgatgatgat
agtgatggcgaggatagtgataattctagaaaacgtaaaaaaagtgatgatgaagatttt
gatgatcgtttagaagatgacgattatgacctaattgaagaaaatttgggagttaaagtt
gaaaggaaacgtcgttttaagcgtttacgtagaatacaagatgaagagtcagaagtggaa
gaagaaagagaaataaatgatgaaagagatgctattgccaacgaattgtttcaaggttct
ggagacgaagatgaagaaagaagtgaagttagccatagaggtgaagtggaagggtatagt
gaggaagaaagtgatgatgaagacgattttattgtggatggtgatggaatacccataact
gaaaagaggaaaaagaaaagacctgtattttcagatgctgcattgcaagaagcccaagat
atttttggcattgattttgattatgacgaatttggaaaatatggagaggatgcgtttgaa
gaggaagacgaagatgaatatattcatggcgagataggaaaccgcccaaggccatcaaaa
aaacatcttaagagaaagagtacaaggaaaagtatttttgaagtatatgaacccagtgaa
cttatacgcggacatttcaccgatatagacaatgagattcgtactacagacattcctgaa
cgcatgcaacttcgcgctgttcccattatacctacagtggaaggttcggatgaattagat
cttgaagccaaatggatatataaacaggcattctgtcaaccaacaatttcaatacaagat
tctcatctaaatgaagaagccaaagaaagagctaaaaagggtccgcaaacaatcggcaaa
attaagaaagccttagattttatgcgtaatcagaacttcgaagttccgtttattgcattt
tatagaaaagaatatgtgttgccagagttaaacatcaacgatttgtggaaaatttataag
tttgacgtaaaatggtgctatctgaaacaaagaaaagaaaatttattgaaactctttgag
aagatgaggaattttcaattagatgagattatgaaaaatcctgatgctccattacccgac
aacatacgagttattaaggacgatgatattgaacgacttaaaaatgctcatacttttgaa
gaattaaatgatatttatcgacattttatgttgtattataatcaggatgtgtcatccatg
caagaaattgcacataagaaggaaaaacaagcacaaaggaaagctaaattggaaaaaaga
aagcaacgacttgcagaagctgaagaaaatggagatctatctgaaattcctgatgcagag
gatgaagaagaagaaatagacgaatcattaaagcagccagttagaaaaggtccttactat
atttgcagaaaagctggattagacggatttactaaaagatttggtctctcacccgagcat
tttgctgaaaatcttcgagacaattatcaacgtcatgaagtagatcaagatccaatagaa
cctgcaatagtagcaaatgaattttgttctgcaatatttacgacaagtgacgaagtagtt
aaagctgcacaattaatggttgcgattcagttggcgcacgaaccattagttcgtaaatgt
gttagagaaatgtatatggaaagagcaaaagtatctgtaaaaccaactaaaaaaggaata
aaggagatagatgaagggcatgccatttatggattaaaatatcttaaaaataagcctgta
cgggatcttgttggtgatcaattcttaaaactaattgtagcagaagaagataaattaatt
acacttttctttagtgacatgatagaaggaaatactagcaataattatatcaatgaaata
aagcaactatattatagggacgaatttagtaaaagtgtccaagattggaatgcattaaga
actggtagtgttgaaatagctttaaatcggattattatacctcaattgaaaaaagaattg
agatccaatcttttgttagaagcaaaagaatgcgttatgaaagcgtgttgccgcaaaatg
tacaattggataaaaattgctccatatacttgtgaatttcctgatgaagatgacgaagat
tggaatactagcaaaggaattcgtgtgatgggtttggcatatgtgcctgatccgtctcaa
gcagcctttacttgcataatttctccagaaggagaatgtactgattacctaagattaccg
catttattgaaacgtaaaaatagttttagagaaaatgaaaagatattgaaagaggtagac
ttactaggaatcaaaaattttattgccacaaagaaaccacatgttgtggtagtaagtggt
gaatctagagaagcattaatgatagtatctgatataaaagaatgcatagttaatcttgca
gaagaagaacaatttcctacaatcccagtggaaatatgtgacaatgaacttactaaagtt
tatgcaaatagtaacagaggtatatctgagttcagagattatccagaagtattaagacaa
gctatatctttagcaagaaaaatacaagatcctctattagaattctctcagttgtgtacc
atagatgaagaaattctgtgccttaaatatcatcctttgcaaaatcaacttcctaaagat
gatcttatagaaaatttatatttggaatttataaatcgtataaatgaagtaggagtagat
ttaaataaagcagttcagcagccttatacagcgaacctagtacaatttgtgtgtggctta
ggacctagaaaaggacaggctctcattaagattttgaaacaaactaatcagagactagaa
aatagaacacagcttataacagcatgtcatatgggacctaaagtatttgttaattgtgct
ggttttattaaaattgatacaaatagtttaggagatagcacagaggcatatgtagaagta
ctagatggctcacgtgtacatccagagacatatgaatgggcaagaaaaatggcagtagat
gctttagagtatgatgatgaagatgcaaatcctgctggtgccctagaagaaattcttgaa
tcaccagaaagattaaaagatttagatttggatgcatttgcagaggagcttgaaagacag
ggttttggaaacaagtgcattactctttacgatataagagctgaactgaactgtagatac
aaagacctccgtgtaccttaccaatctctaaatactgaaaaattatttgatattttgact
aaagaaactccggaaactttctatgtcggtaaattagttttggcaacagttgttggtata
agtcatagaagacctcaaggagatcaattagatcaagcgaatcctgttcgaaatgatgaa
accggattatggcaatgcccattttgcttgaaaaacgattttccagaattgtccgaggta
tggaatcattttgatgccggtgcatgtccgggaaaagcaactggaattcgtttaaggttg
gataatggaatatctggatatattcacgtaaaaaatctgtctgataaacatgtcgctaat
ccagaggaaagagtacgtgtcggacaagtaattcattgtcgcataattaagatcgaagta
gaacgatttagtgtcgaatgtactagcaagacgagtgatcttattgataaaaatcacgaa
tggagacctcagcgagacgtttattatgaaacagaggcagaagaaaaagatacgaaaaca
gaggaggatgctaagaaattgcagcaacgacaaacttatgtaaaacgtgttataattcat
cctagtttccataatataagttttgcagaagctgaaaagttaatgttaactgtgaagcaa
ggggaagcaataatacgacctagcagtaagggatccgatcatttgaccgtaacatggaaa
gtcacagaaaatatttatcaacatattgatataagggaagaaggcaaagaaaatacattt
tctttgggtcgcagtttatggattggcaatgaagaattcgaagatttggatgaaattatc
gctagacatattaatccgatggctgcttatacttcggaacttttagattttaaatattac
aaaacaagtgtagaaggcattaaagataaagcagaagaaattttgaaggaacagaagaag
caaaatcctggagggataccatatattgtgtctgcagctaaaaattatcctggaaaattt
ttactttcgtatttaccacgaattcgttgccgtcatgaatatgttactgtaatacctgat
ggatttcgatttagaggtcaaatgtttagtagaataaatgacttgttccgctggttcaaa
gaacactttagagatcctataccaggacaagctacacctggtactccacatggaactatg
acttccagaacaccatacaatggtactccaggactgaatggagtgaatccagatacaata
cagagggtagcacagaatatgccacaccacttgttacattcactctcaaaagtagcaaat
caaactccacatcattatccaccatacactccaggagctgctagtgttaataactatgga
atgtatggaagtacgccttatacaccttccggccaaactccgtttatgaccccctaccat
acaccacaccacacgccccatcatccacaaacacctaatcactctcaaggaccattctta
caaccaattcctccagtaatgaattcaaattcacatagaactgcaagatcacatagatct
gtctctagtacttctgatgcaacgaattggacaaaagcggcggaagcatgggctcgatca
aagcaatcttcaaaagaatttaatactactccaagatacaatgaatctagaaaaacacca
cgaaatcaggaagctcaaaatgggagagcaactccgcgcaatagaaccccatctgctcgt
actccgtcttataaatctcctagagaaactccatttacaaattctagtccccggagtatg
tctctaagtggagatggtactcccctatatgatgaaagttggtaa
DBGET
integrated database retrieval system
