KEGG   Bombus huntii (Hunt bumble bee): 126864439
Entry
126864439         CDS       T10446                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
bhun  Bombus huntii (Hunt bumble bee)
Pathway
bhun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126864439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bhun03041]
    126864439
   03036 Chromosome and associated proteins [BR:bhun03036]
    126864439
Spliceosome [BR:bhun03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126864439
 Complex B
    126864439
 Complex C
   U2 SnRNP specific factors
    126864439
Chromosome and associated proteins [BR:bhun03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    126864439
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 126864439
NCBI-ProteinID: XP_050471756
LinkDB
Position
4:13035544..13043675
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKKEIQNASTEKDQVGLGKTGFYDQDIYDGSNNKYEGYVT
SIAANDEIEDEDYEPTTFSTNKRPGYTAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDIGSRTYTVIMREQLLKGEETELRKKLAEKAKEGT
LKANGEPKPAPKKRGRWDQTDDAPTPKKPSGTTATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWDATPGHATPGAATPGRETPSHEKTVSSRRNRWDETPKTERETPGH
SSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQT
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFP
PGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQTEDKTAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggattccattcccagaacgcatgaagatattgaagcacaaatacgagaaatacagtca
aagaaaaaagagattcaaaatgcatctactgaaaaggaccaagtagggctaggaaagact
gggttttatgatcaagatatttacgatggaagtaataataaatatgaaggctatgttaca
tctattgcagccaatgatgagattgaggatgaagactatgaaccaacaacttttagtact
aataaaagaccaggctatactgcaccagcagcattactcaatgatgttgcacagagtgaa
aaggattatgatccttttgcggacagacgacgacccaccatagctgacagagaagatgaa
tataggcaaaaaagacgaagaatgattatatcgcctgagcgtgtcgatccttttgcagaa
ggtggtaagacgccagacatcggttctaggacatataccgtgattatgcgggaacagtta
ttgaaaggagaagaaactgagttaagaaaaaaattagcagaaaaagccaaagagggaaca
ttgaaagcaaatggtgaacctaaacctgcacctaagaaaagaggtcgttgggaccaaaca
gatgatgctccaacacctaagaaaccatctggtacaactgcaacaccaacatcatgggac
aatgcagatgtaacacctgctgcaattaggtgggatgaaacgcctggtcatggtaaaggt
ggagaaactcctggtgcaacaccaggcgtaagtacaagaatgtgggatgctactccagga
cacgcaacacctggtgcagctactcctggtagagaaactccttctcatgaaaaaactgtt
tcaagtcgtagaaatcgttgggatgagacgccaaaaactgaacgtgaaacacctggtcat
agcagtggttgggcagagactccaagaacagatcgagttgcaggagatttaattcaggag
acaccaacaccttctgctagcaaacgtcgaagtcgatgggatgaaacaccttcgaatcag
acacctgggtctatgacgccacaaactccagcaactcctcttactacaccacatcaaact
tcaattttaacacctagtggtgtaacaccaacaggacccaaagctatgggattggcaact
ccaacaccaggacatttaatgtcaatgacaccagaacagcttcaagcatatcgttgggaa
cgagaaatagatgagagaaatagaccactctcagacgatgaactggatgccctgttccca
cctggatacaaagttttgcaaccacctgcgggatatattccaattcgcacacctgcaagg
aagctcactgctacaccgacgcctattgcgggcacaccacaaggatttttcattcaaact
gaggataaaactgcgaaattcgtagacaatcaaccaaaaggaaatttgccttttatgaaa
ccagaagacgcacaatattttgataagttattagtcgatgttgatgaagaaacgcttagt
cctgaagaacaaaaagagaggaagataatgaagctgctattaaaaattaaaaatggcaca
ccaccaatgaggaaagctgctctaagacaaattacagataaagcaagagaatttggcgcg
ggtcctttatttaatcagatactccctcttcttatgtctcctacacttgaagatcaagaa
cggcatcttcttgtgaaagttattgatcgtattctttataaactggatgatttggttaga
ccctacgtacataagattttggtcgttattgaacctttacttattgatgaagattactat
gctcgtgtcgaaggtagagaaattatctctaatttggctaaagcagctggtttagcaaca
atgatctcgactatgagaccagatattgacaatattgatgaatacgttcgtaacacgaca
gccagagcattcgctgtggtcgcatcagctctaggaattccttctttgcttccatttctt
aaagccgtgtgtcgcagtaaaaagtcatggcaagctcgtcacacgggtatcaaaattgta
caacagattgctattcttatgggatgtgctatattaccacatttgaagagtttggttgaa
attatagaacatggtctcgtggatgagcaacagaaagttcgtactatcactgctttagca
attgctgcattggcagaagcagccacaccatatggtatcgagagctttgactctgttcta
aaaccgctttggaaaggtattcgtacacatagaggaaaaggtcttgctgcattcttaaag
gctattggttatttaattcctcttatggacgcagaatatgccaattattatactcgtgag
gtgatgttaattcttattcgtgaattccagtctcctgatgaagaaatgaaaaagattgtt
ctgaaagtagtgaaacaatgttgtggaacagatggtgtagaagcacaatatattaaagat
gaaatcctcccacatttcttcaaacatttttggaaccatcgaatggctttagatcgtaga
aattacagacaacttgttgacacgactgtagaaattgcaaataaagttggtgcatcagaa
attataaatcgtgtggtagacgatttaaaagatgaaaacgaacagtataggaagatggtt
atggaaaccattgagaaaataatgggaaatttgggagccgcggatgttgattctcgttta
gaagaacaactcattgacggtattttatatgctttccaggaacaaacaacagaggatgtt
gtaatgttaaatggttttggaactattgtgaatacattaggaaaaagagtgaaagcatac
ctcccacaaatttgtggtacaattttgtggagattgaacaataaatctgcaaaagtaaga
caacaagctgccgacttgatatcacgaattgccgttgtcatgaaaacttgtcaagaggaa
aaactaatgggtcatttaggtgtcgttctttatgaatatttaggagaagagtaccctgag
gtattaggaagcattttgggcgcattgaaagctattgtaaatgtcataggaatgacaaaa
atgacaccacctattaaagacttactaccacgtcttactcctattctgaagaacaggcat
gaaaaggtacaagaaaactgtattgatctcgtaggtagaatcgcagacagaggacccgag
tatgtatctgccagagaatggatgagaatatgcttcgaacttttagaattgctcaaagct
cacaagaaagcgattcgaagagctacagtaaatacatttggttatattgccaaagcaata
ggacctcatgatgtattagcaaccctcttgaataacttaaaggtacaggaacgtcaaaat
cgtgtatgcactacggtggctatagctattgtagctgaaacctgtagtccatttacggtt
cttcctgctttgatgaatgagtatagagtaccagaactaaacgtacaaaatggtgtatta
aagtctttatcctttttgtttgaatatattggagaaatgggaaaagattacatttacgct
gttagcccactattagaagatgcgctcatggacagagatttagtgcacaggcaaactgca
tgtgctgctattaaacacatggcattgggtgtttacggatttggttgtgaagacgcatta
atacatttattgaatcacgtatggcccaatgtttttgaaacttcacctcacttggtgcaa
gcatttatggacgctgtagatggtttacgtgttgctcttgggccaattaaaatactacaa
tacactttgcagggattgttccatccagcacgaaaagtacgagatgtatattggaaaatt
tataattctctttatataggtggacaagatgctcttgtagctggttatcctcgaattatg
aatgatccaaagaatcagtatattagatacgaattggactatgttttgtaa

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