Bombus huntii (Hunt bumble bee): 126864694
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Entry
126864694 CDS
T10446
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126864694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126864694
03012 Translation factors [BR:
bhun03012
]
126864694
Enzymes [BR:
bhun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126864694
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126864694
Translation factors [BR:
bhun03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126864694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
ATPase
AAA_14
NPHP3_N
ABC_tran
AAA_19
PhoH
NB-ARC
NACHT
Sigma54_activat
RsgA_GTPase
AAA_16
AAA_23
Rtt106_N
Motif
Other DBs
NCBI-GeneID:
126864694
NCBI-ProteinID:
XP_050472212
LinkDB
All DBs
Position
4:complement(11880518..11885177)
Genome browser
AA seq
977 aa
AA seq
DB search
MSRPYGLFSAQRMYSRHRYGDRGESSQSGGSHFERDSHGRGRGGGHPPWLRGKEIGLYYR
DKAKQKSKKKETRGIKLPEHLQEKIEHVLNNSKGYYEKLYNNAYTEDTYDVLENKYVHIR
DSQFKRKFMNMVSGNMQENLARALLVKSKLERDIELDKKLLNEHRTLQSTQEYENMKQFR
LKLPSYHKRSKILDLIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGSIVRIICTQP
RRISAISVAERVAAERAERLGKSVGFQIRLEKVLPRDKGSITFCTTGMLLQFMQGDPALK
EFSHIILDEIHERSTESDFILALLKLIIPKRPDLKVILMSATLNSERFSSYYNDCPMIHI
PGFTYPVTEFYLEDILSFTEYQFPASTAIPQDHRKHIKKYKQEQRKRDEFHDVLYPYVRQ
LIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTNDPGAILVFLPGMMDIIKLHKI
MLENRQYPQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVV
DCGKMKFGKFDLQKNVQTLEPEWVSLANAKQRRGRAGRVRPGVCYHLYSKAREMALDQYP
LPEMLRTRLEEVILQIKMLQLGKARTFLASVMDPPNMKAIDLSLDLLRTLNALDDEEQLT
PLGYHLAQLPLDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPLGKEEDARKKKLE
LNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYFLSFSTLKLLSEMKTQFAQHLCRMK
FMDSENPADINANRNSSNITLVKAVVCAALYPNIAVIRRVTKNGTRAWTPEDGSVTIHPS
SVNDRVREYPNPFITYFTKQLSTAIYLHDTTCVSAPILLFTAPKMSIRKERGNYFISLAN
NQMFACDLQSAQLIQKLQEQFNNMLEYKITHPGTVCWNSFEGDVLNAIIELVSQKDEELG
FSNSDIQNCEDDIHDKV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccttacggactattttcagcacaaagaatgtattcgagacatagatatgga
gatagaggtgaaagttctcagtcaggaggatcacattttgaacgtgatagccatggacga
ggcagaggaggaggacatccaccttggttgagaggcaaagaaatagggctttattataga
gataaggccaaacaaaagtccaagaaaaaggaaactcgaggtattaagttacccgaacat
cttcaagaaaaaattgaacacgtgttaaacaattctaaaggatattatgaaaaattatat
aacaatgcatacactgaggatacgtatgatgtgttagaaaataaatatgtgcacattcgt
gactcccaatttaaaagaaaattcatgaatatggtatctggtaatatgcaagaaaatctt
gccagagctttgctagttaaatcaaaattagaaagagatattgaactagataaaaaatta
ttaaatgaacataggacattgcaatcaacgcaggaatatgaaaacatgaaacaattcaga
ttaaagttaccatcatatcataaaagatcaaaaatattagatttgattaaggaaaatcag
gttattgtaataagtggagaaactggttgtggaaaaacaacacaggttgctcagtatata
ttggatgatcaaatagaacaagaaaatggtagcattgtgcgaattatatgtactcaacct
aggaggatatcagctatatctgttgctgagagagttgcagctgagagagcagaaaggctt
ggtaaatccgttggttttcaaatccgacttgaaaaagtattaccgagagataaaggcagc
ataacattttgtactactggaatgttattgcaatttatgcaaggtgatccagccttaaaa
gaattttctcatattatattagatgaaattcatgaaagatctactgaaagtgacttcatc
cttgctttactgaaactaattatccctaaaagacctgatttgaaagttattttaatgagt
gcaacacttaactctgaaagattttccagttattataatgattgcccaatgattcatatt
cctggctttacttatccagtaacagaattttatttagaggacatcctatcctttacagaa
tatcaatttcccgcatcaactgcaatacctcaagatcatagaaaacatatcaaaaaatat
aaacaggaacaacgaaaaagggatgagtttcacgatgtgctatatccttatgtacgacag
cttatagctacgaagaaatattcaaaagaagtaattgaacaattacggaatccaaacagc
gagaaattgtctcttgatctcatagaacaattagttaggtacatttgtaaaactaatgat
cctggagctattttagtttttcttcctggtatgatggatataataaagctacataaaatt
atgctggaaaatagacagtatccacaaaatcagtatgttatttatcctcttcattctcgt
atgccaactgtcgatcagaagctcgtatttaaaacaccacctgaaggagttcggaagata
ataattgcaacttcgatagccgaaacttctataactattgaagatgtagtatatgttgtt
gattgtggaaaaatgaaatttggtaaattcgatctccaaaaaaatgttcaaactttggaa
cctgaatgggtatcgttagctaatgctaaacaaagaagaggtagagcaggcagagtaaga
cctggtgtctgttatcatttgtactcaaaagctagagaaatggcactagaccagtatcct
ttacccgaaatgttaaggacgcgtttagaggaagttattttacaaataaaaatgttacaa
ttgggaaaagctagaactttcttagcaagtgttatggatcccccaaatatgaaagctata
gatctatctttagatttactccgaactctcaacgcgttggatgacgaggaacaattgact
cctttggggtatcatttggctcaattacctctagatccacgtacagggaaaatgatcata
tgggcatcattattttcgtgtgtagaaccagtttttgcaatcgcggcgagtcttagtttt
aaagatgctttttactgtccacttggaaaagaggaagacgcacgaaaaaagaaactcgaa
ttaaatatgaatcaatttagcgatcacatcgcgttatctgaagcattaagaagattcgag
atcgcgtataaaaaaagttatgcaagttctttttgtagggaatatttcctctcttttagt
acgctcaaactactttctgaaatgaaaactcaatttgctcaacatttgtgtcgaatgaaa
tttatggactcagaaaatcccgctgacattaatgctaacaggaactccagtaacataacc
ttagtgaaagcagtagtatgcgctgcattgtatcctaatattgctgttataaggagagtt
acaaaaaatggaaccagagcatggactccagaagatggcagtgttactatacatccgtca
agtgtaaatgatagagttagggaatatcccaacccatttattacatattttacaaagcaa
ctctcgacagcgatatatttgcatgatactacatgcgttagcgcgccaattttattattt
actgctccaaaaatgtctataagaaaagaaagaggaaactattttatcagcttagcaaac
aatcaaatgtttgcttgcgatttgcaaagtgcacaacttattcagaaattacaagaacaa
ttcaataacatgttagagtataaaataacacatccaggaacagtatgctggaatagcttt
gaaggcgatgtattaaatgctatcatagaactggtttctcaaaaagacgaggaattggga
ttttctaattctgatattcaaaattgtgaggatgatattcatgataaagtttga
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