Bombus huntii (Hunt bumble bee): 126864890
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Entry
126864890 CDS
T10446
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03030
DNA replication
bhun03410
Base excision repair
bhun03420
Nucleotide excision repair
bhun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126864890
03410 Base excision repair
126864890
03420 Nucleotide excision repair
126864890
03430 Mismatch repair
126864890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhun03032
]
126864890
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126864890
DNA replication proteins [BR:
bhun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126864890
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126864890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
BRCT
Rad17
BRCT_2
AAA_22
AAA_30
AAA_14
RuvB_N
F55H2_N
PTCB-BRCT
AAA_assoc_2
AAA_19
RNA_helicase
AAA_33
AAA_7
AAA_5
AAA_16
Rv0313_N
Motif
Other DBs
NCBI-GeneID:
126864890
NCBI-ProteinID:
XP_050472702
LinkDB
All DBs
Position
4:complement(10726333..10732428)
Genome browser
AA seq
1052 aa
AA seq
DB search
MPRDIRSYFQTIKTNSNVAPAKATKKRIIISSDEDEDKSQSPRKRPKKTKLLEKKAIKSD
SNEDIKIISPADMFGKNPVNRQEATKISRQSLKQKAEEVPKISKKLQKKEAEGHNDDDFE
ATLRQLDTSDIEQRYLTEREKVNEDTSLHESSIENKEKTPIKNKEDVKKKTRPDKTNQEK
NNKEHEPKNKKHSNNILDEDIKHKGSENSSKFKHTKKSSKTSSAISKMEVEYLKEKNETS
PKKIDTSDVYEEKIEKKKQNAAMYQQYLQRGGARNPGSKEIPVGAEQCLTGLSFVITGVL
DSLEREEAEELIKQYGGRILHQISKKTDYVIVGDQAGPAKLSKATNLNIKKISEDDLLEL
IRTRPAGQSDNVTQPRTKSKERSKRKFAESSEESTPKKKKITVNEETKKAAKVHSPHKTE
NSKREIEDSLKQELYNKDEKIKSSIEKKQNEYKESLVQDKKEIIDVKDIKIQMNTLQDIS
GNIPVQALVEKYRPKTMKQILGQQGDKSNFKKIHTWLMNWHKNQSGQVKHTRPSPWAKDD
NGAFFKAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTI
KNYFKDVKSKPSSKHVLLMDEVDGMAGNEDRGGLQELITLIKSTDIPIVCICNDRNNPKM
RTLSNYTFDLRFSKPRLEQIRGAMKSMCFKENIQISNEDLDRLIESTNQDIRQVINHLAL
FVGQTGSQEKNEKKHINKDLRLGPWDVVKKVFSVEEHKHMSISDKSNLFFHDYNIAPLFV
QENYLMVIPQVPKNELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTA
MSGHIGGQINFPAWLGRNSKTGKFNRLMQEITLHARLATGASKEAINLDYIRPLRNTILR
PLAVGGIENVDTAIDVMNHYHLLREDLDSLVEISLWPGDRDPFQIIDSKVKAAFTRAYNK
SSVALPYIVSGTSKKKVTSSIQEEGFLEEEEEEIDSDQNDDNLDADKMIKAKKAGINKNT
ESKGKSTDKTEKKGKNSSDKSNKRGRGRGKAK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggatatacgatcctattttcaaactattaaaacaaattccaatgttgctcca
gcgaaagctaccaaaaaacgaattattatttcgtctgacgaagatgaggacaaatctcaa
tcgccacgtaaacggcccaagaagacaaagttattggagaagaaagctattaaatctgat
tccaatgaagatattaaaatcatttctcctgctgatatgtttggtaaaaatccagtaaac
agacaagaagcaactaagatatctagacagtcattaaagcagaaagctgaagaagtacct
aagatatctaaaaagttacaaaagaaggaggctgaaggtcataatgatgatgattttgaa
gctaccttacgtcagttagatacatctgatattgagcagagatatttaacagagagagag
aaagttaatgaagatacaagtttacatgaaagcagtattgaaaataaagaaaagacaccc
attaaaaataaagaggatgttaaaaagaaaacaagacctgataaaacaaatcaagaaaag
aataataaagaacacgaaccaaagaataaaaaacattctaataatattttagacgaggac
attaagcataaggggtctgaaaatagtagcaaatttaaacatacaaagaaatcttctaaa
acttcatctgctatttctaagatggaagtagaatatctgaaagaaaaaaacgaaacttct
cccaaaaagatagacacttctgatgtatatgaggaaaagattgaaaagaaaaaacaaaat
gctgcaatgtatcagcaatatcttcaaagaggaggagccagaaatccaggctcaaaagaa
atccctgttggtgctgaacagtgtctaacaggattaagttttgtaataactggcgttttg
gattctttagaaagagaagaagctgaagaacttattaaacaatatggtggacgaatttta
caccaaatttcaaagaagactgactatgttatagtaggtgaccaagctggtcctgcaaaa
ctgtcaaaggctaccaacttaaacataaaaaaaatatcagaagatgatttgcttgagctg
atacgtacaaggcctgcaggtcaaagtgataatgtaacacaacctcgtacaaaatcaaaa
gaaaggtcaaagagaaaatttgcagaatctagtgaagagtcaacaccaaagaagaaaaaa
attactgtaaacgaggaaacgaaaaaagcagcaaaagtacattcaccacataaaaccgaa
aatagtaaaagagaaattgaggactcattaaaacaagaactttataataaggatgaaaaa
ataaaatcttcaattgaaaagaaacagaatgaatataaagaatcgcttgtacaggataaa
aaagaaataattgatgtgaaagatataaaaatacaaatgaatactttgcaagatataagt
gggaacataccagtgcaggcattggttgaaaaatataggccaaaaactatgaaacaaatt
ttggggcaacaaggggacaaaagtaattttaagaaaatacacacttggttaatgaattgg
cataaaaatcaaagtggtcaagtgaaacatacaagacctagtccttgggcaaaagatgat
aatggagcttttttcaaagctgctttgttatctggtcctcctggaattgggaaaaccaca
actgtccaagttgtctgtaatgaattaggttttgatcttatagaatttaatgcatcagat
accagaagcaaaaaacttctgcaagaagaagtatcagaacttttatctaataccacaata
aaaaattattttaaagatgttaaaagcaaaccatcatcgaaacacgtattgttaatggat
gaagtagatggaatggctggtaacgaggatcgcggtggtctacaggaattaattactttg
atcaaatcaactgatatacctattgtttgtatttgcaatgatcgaaataatcctaaaatg
agaacactttctaattatacatttgaccttcgattttcaaaacctagattggaacaaatt
aggggtgcgatgaaatctatgtgttttaaagaaaatattcaaatttcgaatgaagatctc
gatcgtttaattgaatcaactaatcaggatattcgtcaagttataaatcatttggcatta
tttgttggacaaactggttctcaggaaaaaaatgaaaagaaacatataaataaggatttg
agattaggtccttgggatgttgtaaaaaaagtattttccgtagaagaacataaacatatg
agtataagtgacaaaagtaacttatttttccatgattacaatatagcaccattatttgta
caagaaaattacttgatggttatacctcaagtgccaaaaaatgaattgttaggaagggta
gcagaaagtgctgaaagtatagcattaggagatgtagttgaaaaatccataagaagtaat
aatgcttggtctcttttaccaatacaagcttattattcttctgtaatacctggaacagca
atgtctggtcacattggtggtcaaattaattttccagcttggcttggacgtaattcaaaa
actggtaaatttaatcgcttaatgcaggaaatcactttacatgcacgtttggctacgggt
gcaagtaaggaggctataaacttggactacattagacctcttagaaatactattctcaga
cctttagcagttggaggtattgaaaatgtagatacagcaattgatgttatgaaccactat
catttactcagagaagatctagattcattggtagaaatttctctatggcctggtgatcgt
gatccgtttcaaattatagatagtaaggtgaaagctgcttttacaagagcatataataaa
agttctgtggctctaccttatatagtgagtggaacatcaaagaaaaaagtaacatcaagt
atacaagaagaaggtttcttagaagaggaggaagaagaaattgactctgatcaaaacgac
gataaccttgatgcagataagatgattaaggcaaagaaagctggtataaacaagaatact
gaatcaaagggtaaaagtactgataaaactgagaagaaaggcaaaaatagtagtgataag
tctaataaacgtggaagaggacgggggaaagcaaaataa
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