KEGG   Bombus huntii (Hunt bumble bee): 126865037
Entry
126865037         CDS       T10446                                 
Name
(RefSeq) replication factor C subunit 2 isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
bhun  Bombus huntii (Hunt bumble bee)
Pathway
bhun03030  DNA replication
bhun03410  Base excision repair
bhun03420  Nucleotide excision repair
bhun03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bhun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126865037
   03410 Base excision repair
    126865037
   03420 Nucleotide excision repair
    126865037
   03430 Mismatch repair
    126865037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhun03032]
    126865037
   03036 Chromosome and associated proteins [BR:bhun03036]
    126865037
   03400 DNA repair and recombination proteins [BR:bhun03400]
    126865037
DNA replication proteins [BR:bhun03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126865037
  DNA Replication Termination Factors
   ELG1-RFC complex
    126865037
Chromosome and associated proteins [BR:bhun03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126865037
DNA repair and recombination proteins [BR:bhun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126865037
  Check point factors
   HRAD17(Rad24)-RFC complex
    126865037
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 Rad17 AAA_16 Mg_chelatase AAA_24 Viral_helicase1 AAA_11 AAA_19 RuvB_N nSTAND3 AAA_assoc_2 AAA_18 AAA_28 DEAD AAA_5 NTPase_1 ABC_tran MeaB DNAX_ATPase_lid AAA_23 cpSF2-GREB1 AAA_2 RNA_helicase MipZ AAA_25 SRP54 AAA_3 AAA_30 AAA_29
Other DBs
NCBI-GeneID: 126865037
NCBI-ProteinID: XP_050473045
LinkDB
Position
4:complement(18347529..18349416)
AA seq 351 aa
MGVENIVGESMNIEAVPSTSGYNIKNKEKDKKSANLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSENVFKVCDEPHPLLVKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLISNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQRTMQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggagttgagaatattgtcggtgaatctatgaatattgaagctgtgccatcgacgagt
ggttataatataaaaaataaagaaaaagataagaaatcggccaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattatcattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagcgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgtcgtcagaaataaaatt
aaaatgtttgcccaaaagagggtaaatttggcaaaaggaaaacacaaaataataattctg
gatgaagctgatagcatgactgatggtgcgcaacaagcattacgtaggacaatggaaata
tatagcaatacaactaggtttgcactagcttgtaatacaagtgaaaaaattatcgagcca
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgagaatgtttttaaagtctgtgacgaaccacatcca
ttacttgttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggaacatttatggaaaatgggatattctgcagaagatttgatcagtaatatattc
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatctaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaagaactatgcagaaataa

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