Bombus huntii (Hunt bumble bee): 126865042
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Entry
126865042 CDS
T10446
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126865042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhun03032
]
126865042
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126865042
DNA replication proteins [BR:
bhun03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
126865042
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
126865042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
ECT2_BRCT0
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
126865042
NCBI-ProteinID:
XP_050473055
LinkDB
All DBs
Position
4:complement(4984556..4990873)
Genome browser
AA seq
1295 aa
AA seq
DB search
MTSQGSQIVNINVYFIVSNEYNSEDDCGEDMCHAYNKCCENDLHPIWISEKDCNKMKPNK
TDVFVMEKFEGDTFNKLRTFKCSIIGPKCLLVCFNNGEPIPEGISPVYTTTMRGLCVCAS
GLSSEEKEHVQKLVEYMGGIFTKQLRSRVTHLVTSSVMSAKYETAIDMKIPIVTKEWIEA
IWEMNLKDFVTPHDKMFDKYKASVFLNLVVTSTNLPKRQKEEIKRLINTNGGIFMGPLDG
AKVKVVLAPENSPISEKLKYAKKANIACLTPNWVYESINIGYALPFKDYLIKTLKACSTP
EKFNVCESFNCSTISSITCDTQQGNYIDETSITTMSNVSTLDTLYNNISTVSTTTTVLDR
LTFSEAKAAGPFLDGCNIYLAGFASNQRDKLNKILNVGSATRLDDISDALTHVVVGDENR
AASELKLLKSKRLCPYILTLEWLEESVKLKRPAPEENFLCGQKNTVVQKVTEPASPLSKK
NLQMLQKPKKVSIPSFDIDRKLAMLEKEKESSDLLQHYLQDTADATNDKTMQEFLKPDTL
VLGEDNVKTLVDDHESKKKCLKESITLAADDTAVPINQTSTMNDRLFEGLTFVVTGFNEE
DNFVVETIMAMNGKVVSSTFAGIPDYGVVPKCGAPLKHTVNEIVTDLFIEDCVNQEQIVE
IMYYHKPLSIKKHSTPLSDCVITMSTYVGVERTYLITLAAELGAMCQDIFVRKTNLEKNI
CRSTHLVCPTPEGNKYNAAVKWKLPAVTAEWLKACAVQSKRVDETPFLVGETIAPERPTE
TNETDASSFKVNSNQMDLPTEPAARNIITPKRHLSNLQNQDGSSGDKPLINKRLSLLMNK
TPQSQFHMSTPETTSSQVSRPNSSPDTRKDWAKWVDNFPESKIEEPPLKKRALSTPLSEL
KRQLWQKLKSETCDPERNNADETLSLNDDQASKEAPEEAKDDSKITATTPIRKKLEFTDE
NNALPNNEINMQIAQLDQVLQRASSTPENRYSLSGENADTYSAECSDPIQKFIVKDSQPV
DAIVWEDPSHSKRLITHGEQNESIAHEGYTINNDEEESLEEEIEPVKKKPKFMLSGMKDR
ISYEKVIRDLDGDVSSDACFDISATHLLCIRPSRNEKMLGSIASGKWVLHCMYLRDSEQE
GKFLDEEKYEWGNPKSKGIIPDPSDKIEETIAAAAYRWRLRLLKEPNRPFHNMVALLLAS
GDKYDQFKRLIEAGGGKVVQARPPYDTSPTGKKITHCFVNPKQASQPIDWAMLASKGILC
FMPQYLSDHLTAQTPLNPRECVIDEFKKYLTLLPK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcaagggagccaaattgtaaatataaatgtctattttattgtatcaaatgaa
tataattctgaagatgattgtggtgaagatatgtgtcatgcatacaataaatgttgtgaa
aatgatttacacccaatatggatcagtgaaaaagattgtaataaaatgaaacctaacaaa
actgatgtctttgtaatggaaaaattcgaaggagatacatttaataaattaagaacattt
aaatgttccataattggaccaaaatgtttattagtttgttttaacaatggagaaccaatt
ccagaagggataagcccagtgtatacaacaacaatgagaggtctatgtgtatgtgcttct
ggtttatcttcagaagaaaaggaacatgtacaaaaattagtagaatatatgggaggaatt
tttacaaaacagttacgtagtcgtgtaacacatcttgtaacatcatctgtcatgtctgct
aaatatgagacagcaatagatatgaaaataccaatagttacaaaagaatggattgaagca
atctgggaaatgaatttaaaggattttgttacaccacatgacaaaatgtttgataaatat
aaagcttctgtgtttcttaacttagttgtaacatcaacaaatcttccaaaacgtcagaag
gaagaaattaaacgtttaattaacactaatggaggaatatttatgggtcctttggatggt
gcaaaagtgaaagttgtacttgcacctgaaaatagtccaataagtgagaagcttaaatat
gcaaagaaagcaaatattgcttgtttaacaccaaattgggtatatgaaagtataaacatt
ggctatgctttgccttttaaagactacctaattaagacactaaaagcatgttccactcca
gaaaagttcaacgtatgtgaaagttttaattgttctacgataagttccataacatgtgac
acacagcaaggcaattatatagatgaaacctcaataacaacaatgagcaatgtttctacc
ctcgatactttatataacaacatttctactgtttctacaactactacagtcttggataga
cttacatttagtgaagctaaagcggctggtccgtttctagatggttgtaatatttaccta
gctggattcgcttctaatcaacgggataaacttaacaaaatattaaacgtaggtagtgca
acgcgacttgatgatatatctgacgctctaacacacgttgtcgtcggggacgaaaacaga
gcagctagtgaactaaaactactgaaatcgaaaagattatgtccatacatattgacattg
gaatggttggaagaaagtgtcaaattaaaacggcccgcgccagaagaaaattttttatgt
ggacaaaaaaatactgtagttcaaaaagttacagaaccagcatcaccattaagtaagaag
aatttacaaatgctacaaaaaccgaagaaagtttctataccgtcttttgacatagaccga
aaattggcgatgttagaaaaagagaaagaatcatccgatctacttcaacattatcttcaa
gatacagctgatgcaacaaatgataaaacaatgcaagaatttttaaagcccgatacactt
gttttgggagaagataatgttaaaaccttggtagatgatcatgaaagtaaaaaaaaatgc
ttaaaagaatctataacactcgcagcagatgatactgcagtaccgattaatcaaacatct
actatgaatgatagactatttgaaggtttgacatttgtcgtaactggcttcaacgaggaa
gataattttgtagttgaaactataatggcaatgaatggaaaagtagtttcaagtacgttc
gctggtattccagattatggtgtagtaccaaaatgtggcgcacctttaaaacatacagtg
aatgaaatcgttaccgatttgtttattgaagattgtgtaaatcaggaacaaatagttgaa
attatgtattatcataaacctctatctataaaaaagcattctactccattatcagactgt
gttattacaatgagcacatatgttggagtagaacgaacgtatcttataacattagctgcg
gaattgggtgccatgtgtcaagatattttcgttcgtaaaactaatcttgaaaaaaatata
tgtagaagcacccatttggtttgtccgacacccgaaggaaacaaatataacgctgcagtg
aagtggaaattaccagctgttactgcagaatggttaaaagcctgtgcagttcaatcgaaa
cgggttgacgaaacgccgtttcttgtaggagaaaccatagctcctgaaagaccaactgaa
actaacgaaacagacgcaagttcatttaaagtgaactcaaatcaaatggatctaccaact
gaaccagcagctaggaacattattactccaaaacgacatttatcaaatttacaaaatcaa
gatggcagttccggcgataaaccgttaataaataaaagactcagtttacttatgaacaaa
actcctcaatcacagtttcatatgtctacgccagaaacaacatctagtcaagtatccaga
cccaattcttcaccagacacaagaaaagattgggcaaaatgggttgataattttccagag
tcaaaaatagaagaacctcctttaaaaaaaagggcacttagtacacctctttcagaactt
aaaagacagttatggcagaaactaaaaagtgagacttgtgatccagagcggaataatgca
gatgagacattatctcttaacgacgatcaagcgtcaaaagaagcaccggaagaagcaaaa
gatgatagcaaaataaccgctactactcccattaggaaaaaattagaattcacagatgaa
aataatgcactgccaaataatgagattaatatgcaaattgcacaactggatcaagtactt
caaagagcatcaagtactccggagaataggtattctctttccggagagaatgcagacaca
tatagcgctgaatgttccgatcctatacaaaaatttattgtaaaagattctcaacctgtc
gatgctattgtatgggaagatcccagccactcaaaacggttgataacgcatggagaacaa
aatgaaagtatcgcacacgaaggatatactataaacaatgatgaagaagaatccttagaa
gaagaaattgaaccagtaaaaaagaaaccaaaattcatgctatcaggcatgaaggataga
atatcatatgaaaaagtgataagagatctcgacggtgacgtatcatcagatgcttgcttt
gatataagtgcaacacatttgctttgtattagaccatcaaggaatgaaaaaatgcttgga
agtatagcatcaggaaaatgggttctacattgcatgtatttgcgggactctgaacaagaa
gggaaattccttgatgaagaaaaatatgaatgggggaatccaaaaagtaaaggcattata
ccggatcctagtgacaaaattgaagaaacaatcgcagcagccgcgtatagatggaggctt
agattattaaaagaaccgaataggccgtttcacaatatggttgctttgttattagcttct
ggggacaaatacgatcaatttaaaagattaatcgaagctggaggtgggaaagttgtccaa
gcacgaccaccatacgatacaagtccaactggaaagaagattactcattgtttcgtgaat
cctaaacaagccagtcaaccgatcgactgggcaatgttggccagtaaaggtattctctgc
tttatgccacaatatttaagcgatcatcttactgcacaaaccccattaaatccacgagaa
tgtgtaattgacgaatttaaaaagtatttaacattattaccgaaataa
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