Bombus huntii (Hunt bumble bee): 126865504
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Entry
126865504 CDS
T10446
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bhun Bombus huntii (Hunt bumble bee)
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhun01009
]
126865504
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126865504
04131 Membrane trafficking [BR:
bhun04131
]
126865504
03036 Chromosome and associated proteins [BR:
bhun03036
]
126865504
Enzymes [BR:
bhun01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126865504
Protein phosphatases and associated proteins [BR:
bhun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126865504
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126865504
Membrane trafficking [BR:
bhun04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126865504
Chromosome and associated proteins [BR:
bhun03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126865504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
OsmC
DUF604
Motif
Other DBs
NCBI-GeneID:
126865504
NCBI-ProteinID:
XP_050474055
LinkDB
All DBs
Position
5:complement(5151913..5158588)
Genome browser
AA seq
1165 aa
AA seq
DB search
MVFIGISDPVICKNLYSAVKQLADSEIELIKAIENSEKINNRNIKNTMSVTDKKSAKNSA
KMFNVRPSAALIAAKHEATQRVLQRKKSNNVFVHDIYQKAIDAYNIKRKETGIVFDRSMT
EHKCLWDPSYPECPARLIRVMQRCEELGLINRCKFVTPRQASEDEILMKHSQEQIDILKA
TDECTDVDSLELLSSTYDAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPG
HHAMKSEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFS
IHRYENGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEF
QPDLIIVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLASGKVAVILEGGYCLKSLAES
AALTLRTLLGDPCPMLETLTLPSISVRDTILNTIYAHKPYWKCYQYQDTYSINSTTNNKG
GSTNQYLPVVTFKGTDIKPEVYETRNCYPTQNKEVIEMIEKQLNALIQFTNLSKAPNKVC
IVYDDRMLKHCDMSNDNHPEKPHRINIIYKKYQECNLLDRCYVQQGRSATREELILVHSK
EYIDSIKDTENLKPKELKRQAETYNSVYLHPETWTSACISTGSLLQVVDSVLNGESQSGI
AIVRPPGHHAAENTACGFCIFNNIAVAARYAVEFHHVKRVLIVDWDIHHGNGTQSIFEED
PKILYMSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDAEYIAAFQQII
MPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYN
INSVAHAMAICTKSLLGDPLPILENGQTPCASAIHTINNVIKTQKQYWAHLVFNLSLPKE
RVLPKPKVPHIKTNERVIDSEEILKHSESKIALEEIETEKMQTRQKNLTTWKLINKVASQ
EDCEKLQEFLKSVHERCTHTTINTSYNDEGSKYTKKCMNQDEEEEHSDENITNIAAGSSG
EQGERASAQMTGNKSLHDYLLENSQALVDGDMFAVIPLRECPHLDSVKDVPVSGIDIYSP
CIECESNVENWICLQCYTVHCARSINQHGLIHAEEMEHPLALSFSDLSVWCYKCEAYIDN
VRLFAARNAAHQSKFNEELPWTYEI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggtctttattggaatttctgatcctgtgatctgcaaaaatttatactctgctgttaaa
caattagcagacagtgaaatcgagttaataaaagctatagaaaattcagagaagataaat
aatagaaatattaaaaatactatgtctgtgacagataagaaaagtgccaaaaattctgca
aaaatgtttaatgttcgtccatctgctgctttaatagcagctaaacatgaagcaacacaa
cgtgtattacaaagaaagaaatctaacaatgtttttgtacatgatatatatcaaaaagct
attgatgcatataatataaaaaggaaggaaactggcattgtatttgatcgttctatgaca
gaacataaatgcctttgggatccaagttatccagaatgtcctgctaggttgataagagtt
atgcagagatgtgaggagttaggtttaataaatagatgtaaattcgttacaccaagacaa
gcctcagaggatgaaatactaatgaagcacagccaagaacagatagatattttgaaggct
actgatgaatgtacagatgtagatagtttagaattattatcatcaacatatgatgccatt
tatatacatccttctacctatcaattgtctttgttagctgtgggttcaacaataaattta
gtggaaagcatttgcaaagaagaaattcagaatggtatggccattataaggccaccagga
catcatgcaatgaaatcagaatattgtggatattgtttcttcaataatgtcgcaattgct
gctgaaaaagttttaagtagcaatttagctagtaaaattttgattgttgattgggatata
caccatggacaagctactcagcaaatgttctataatgacccacgagtaatttatttttca
attcaccgttatgaaaatggagaattttggccaaatcttagagaatctaatttccatttt
gttggagatggtttaggagaaggatataattttaatgtgccacttaataaaactggcatg
accaatgctgattatttagccatatttcaacaagttttattgccaatggcctatgagttt
caacctgatcttataatagtatcagctggatatgatgcagcgttgggctgtcctgagggt
gaaatgttgctaacacctgcatgttatgctcatttactatcatcattattgagtttagcc
tctgggaaagttgctgttatattggagggtggttattgtttaaaatcattagcagaaagt
gcagcattaacactacgtactttgttaggtgatccatgccctatgttagaaactcttaca
ttaccttcaataagcgtacgtgataccattttaaatacaatttatgcacataaaccatat
tggaaatgctatcaataccaagatacatacagtattaatagtacaacaaataataaagga
ggaagtactaatcaatatttaccggtagttacattcaaaggaactgatattaagcctgaa
gtgtatgagactcgaaattgctacccaactcaaaataaagaagttatcgaaatgatagaa
aagcagttaaatgcattaatacagtttactaatttatctaaagcacctaacaaagtgtgc
attgtttatgatgatagaatgttaaaacattgtgatatgtctaatgataatcatccagaa
aaaccacatcgtattaatattatttataaaaaatatcaagagtgcaatttacttgatcga
tgttatgtgcaacagggacgaagtgcaacaagagaagaattaatattagtccattcaaaa
gaatatatagattcaataaaagatacagaaaacttaaaaccaaaagagctaaaaaggcag
gcagaaacttataattcggtttatttgcatcctgaaacctggacaagtgcctgtatatca
actggatcattattacaagtagttgatagcgtattaaatggagaaagtcaatctggtatt
gctattgttaggcctccaggccatcatgctgcagagaatacagcatgtggtttttgtatc
tttaacaatattgctgtagcagctagatatgcggtagaatttcatcatgtaaaaagagta
ttgatagtagattgggatatacatcatggtaatggaactcaatccatctttgaggaagac
cctaaaattttgtatatgtctgtccatcgttatgataatggcaatttttttccaaattct
aaacgagcaaattactcttatgtcggttctctatcaggagaaggtttcactgttaacatt
ccatggaataagaaaggaatgggcgatgcagaatatatagcagcatttcaacagataata
atgccaattgcttatcagtttaatccggaattagtcttagtttctgcgggttttgatgca
tgtattggggatcctctaggaggttgtttcgtgacaccagaaatgtacggacacttaaca
cattggctatcttctttagctaatggtcgtattattcttagtcttgaaggaggttacaat
attaattcagtcgcgcatgcaatggctatttgcacaaaatctttgcttggtgatccttta
ccgatattagagaatggacaaactccatgcgcgagcgctattcatactataaataatgtt
ataaaaacacaaaaacaatattgggcgcatttagtatttaatttatctttaccgaaagag
agagtacttcctaagcccaaagttccacatataaagacaaatgaacgtgttatagacagt
gaagaaatattaaagcattcagaatctaagatagcattggaagaaatagaaacagaaaaa
atgcaaactaggcagaagaatcttacaacttggaagctgataaataaagtggcctcacaa
gaagattgtgagaaattacaagagtttcttaaatctgtacatgagcgatgtacacatacg
acaattaatacttcttataatgacgaaggttccaagtatacaaagaaatgcatgaatcag
gatgaagaagaagaacattctgatgaaaatattaccaatattgctgctggtagtagtggt
gaacaaggcgaaagagcaagtgcgcaaatgactggaaataaaagtttacatgattatttg
ttggaaaattcgcaagcattagtggatggagacatgtttgcagtgatacctttacgagaa
tgtccacatttggatagtgtcaaggatgtaccagtttctggaattgatatatattcacca
tgtatagaatgtgaaagcaatgttgaaaactggatctgtttacagtgttatactgttcac
tgtgctcgtagtattaatcaacatggtttaatacacgctgaagaaatggaacatccattg
gccctaagtttcagtgatttatcagtttggtgttacaaatgtgaggcatacatagataat
gtgcgattatttgccgcgcgtaatgctgcacatcaaagtaaatttaatgaggaattacca
tggacatatgaaatataa
DBGET
integrated database retrieval system
