Bombus huntii (Hunt bumble bee): 126865982
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Entry
126865982 CDS
T10446
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03013
Nucleocytoplasmic transport
bhun03015
mRNA surveillance pathway
bhun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126865982
09122 Translation
03013 Nucleocytoplasmic transport
126865982
03015 mRNA surveillance pathway
126865982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126865982
03041 Spliceosome [BR:
bhun03041
]
126865982
Enzymes [BR:
bhun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126865982
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126865982
Spliceosome [BR:
bhun03041
]
Complex C
Other components
EJC/TREX
126865982
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126865982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126865982
NCBI-ProteinID:
XP_050474935
LinkDB
All DBs
Position
5:complement(12435451..12440907)
Genome browser
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNVCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgatgacctcttggattacgaagatgaagaacagactgaacaattagtt
gatggaagtagggatacacctgctaaaaaagaagtgaagggcacatatgtatctattcac
agtagtggatttagggattttcttcttaaaccagaaatattacgtgcaattattgattgt
ggttttgaacatccatctgaagtacaacatgaatgcattccccaagcagtacttggtatg
gatatattatgtcaagcaaaatctggcatgggaaaaacagctgtatttgtgctagctaca
ttacaacaattagaattaacagagaaccaggtctatgtccttgtcatgtgtcatacacga
gaacttgctttccaaattagcaaagaatatgaacgatttagcaaatatatgcctcatgtg
aaagtcggtgtattttttggtggtttaccaattcaaaaagatgaagaagtcctaaagaac
gtatgtcctcatattgttgttggtacaccaggtcgtatccttgctcttgttcgaaataaa
aaattaaatctgaaacacttgaagcactttatactcgatgaatgtgataaaatgctcgag
ctattagacatgcgcagggacgtacaggaaatatttagaagcactccacacggtaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaagttcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcacggtctacaa
caacattatgtgaaactaaaagagaatgaaaagaacaagaagctatttgaattacttgat
gtacttgaatttaatcaggtcgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaacttctaacagaacaaaattttcctgcgattggtatacacaggggtatgactcag
gaagaacggctatcaaggtaccaacaatttaaagatttccaaaagcgaattttggtagct
acaaatttatttggacgcggtatggatattgagcgtgtaaacatagtgtttaattacgat
atgccagaagattcggacacatacctacatcgagtagccagagctggtcgtttcggtacc
aagggtcttgctattacattagtcagtgatgaaagtgatgctaagatactaaacgatgtt
caagaacggtttgatgttaatattacagagttaccagatgagatagatctagcttcatac
attgaaggacgataa
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