Bombus huntii (Hunt bumble bee): 126867288
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Entry
126867288 CDS
T10446
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126867288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126867288
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126867288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
126867288
NCBI-ProteinID:
XP_050477544
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Position
7:11936029..11942540
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AA seq
1129 aa
AA seq
DB search
MSKVNTLYNYFISPKTPKTPKQSNNKPDEKPSTPKRSREQWNKARIPSKGKENIDVKDKK
KVSKDDDDEEEETEENEPIQPKKRRLIIPDEESGEDSGDEFKPDPEDESEDSDSLSEGVS
ESEPPTASEEESPEKKIKLAKAPRRKPEISTMKNTKDAKKESKPQQQNQTKGSDSVTESW
PHLKYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCIL
FFKVGKFYELYHMDAVISVNEINLTYMKGEFAHSGFPEIGYGRFSASLIERGYKVARIEQ
TENPDMMVQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLIEK
CPSGSNTSHYGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKTL
KILNNTLAACIKEPLLRESQFWSSSTTLKNLHEGEYFRSSDSQFQWPAGLQPYLNQNDTL
GLTSADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYTPSDFSNEKSVASNFANNMV
LDAITINNLRIFGEGSLMKTLDRCCTAFGKRLLREWICRPSCRKNIIIERQQAIQELMDN
TEVMQNARSILAGLPDLERLLSKIHAQGNAAKMNNHPDGRAIMFEGQMYSKKKIADFIVT
LSAFEDVLKIVALFEDFKSTIISRCTKIEPNGEFPSLRESLDYFKTAFDHEEAKKTGCIV
SKRGVDSEYDSVLIELDDVKADAQKYLEKQKQHFGVKVAFYGSDKKRYQIEIPDSQIKKI
GAGYELQSQRKGYKRYYTAETKELLSRQINAEEHRDKVLKDLNRRIFAKFSEKYDIWNMA
VYKLSVLDVLISLAEYALSGDMCIPEVNDGTDERVFIDIRDGWHPCIISDTFIPNNTLLG
TENSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETAAILQHATPYSLVLLDELGRGTSTYDGTAIAASVVNALTKLNCRT
LFSTHYHSLVEDYKNTKEITLAHMACMVENEEQDEVSQETVTFLYKLSEGACPKSYGFNA
ARLAGIPSVITNRAHEISKKLEQETNYKHLFTSLCKANGTAIRDLIAAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaatacattgtacaattattttatttcgcctaaaactcctaaaactcct
aaacaatcgaataataagcccgatgaaaaacctagcacgccgaaaagatcaagagaacaa
tggaacaaagcaaggattccaagcaaaggaaaagaaaatatagatgtcaaagataaaaaa
aaggtctctaaagatgatgatgacgaagaagaggaaacggaagaaaatgaaccaatacag
ccaaaaaaacgaagattgatcatccctgatgaagagtctggagaagattctggtgatgaa
tttaagcctgatccagaagatgaatcagaagattctgattcattatctgaaggagttagt
gaaagtgagccaccaacagcaagtgaagaggaatctccagagaagaaaataaaattggct
aaagctcctagaagaaaaccggaaataagtacaatgaaaaataccaaagatgctaaaaaa
gaatcaaaaccacagcaacaaaatcaaaccaaaggttcagacagtgttacagaatcttgg
ccacatttaaagtatgatttccttcaaccaaataaaatacgagatattcgtagaaaacca
ccaagtgatccagattatgatcctaaaactctttatgttcctctggatttcttgaatcaa
caaactccagccatgagacaatggtgggaattaaaaagcaaacatttcgattgcattctt
ttctttaaagtaggaaagttttacgaattgtatcatatggatgctgtaattagtgtcaat
gaaatcaatcttacatatatgaaaggagaatttgcgcattcgggatttccagaaattgga
tatggtcgtttctcagcaagtctcatagaaagaggctacaaagtggccaggatagaacaa
acagaaaatccagacatgatggtgcaacgttgtagcaaaatgactaggccaacaaagttc
gacaaagtagttaaacgagaaatttgtcaaataagcagtaaaggtacaagagtatacact
ccacaggatgtagaagcatctacggcaaattccaattatttgctatcactaattgaaaaa
tgtccatctggttcaaacacatctcattatggagtgtgtttcttagatactacaatagga
gacttctatctcggtcaattcgaagacgatcggtgcaattctagaatactaactttgctc
gctcattatccgccggttcatgtggtttatgaacgaggtaatttgtctcaaaagacccta
aaaatcttaaacaacactttagcagcatgtattaaagaaccacttttacgcgaatctcaa
ttttggtcatcttcgactacgttaaaaaatcttcatgaaggagaatacttcagaagttca
gactctcagtttcaatggcctgcaggcttacaaccgtatcttaaccaaaatgatacttta
ggtttaacttctgctgatgataaagagttagcagtgcatgccttaggtggttgtgtatat
ttactcaaagaatatctgcttgaacagcaattattagcacaaggacgttttaaaacatat
actccgtcagatttttcaaatgagaaatctgtggcttcaaactttgcgaataatatggtt
ttagatgctattacgattaataatttgagaatattcggcgaaggttctctcatgaaaaca
ctggatcgctgctgtactgcattcgggaagaggttattgcgagaatggatttgcagacca
tcctgtcgcaaaaacattataatcgaacgtcaacaagctatacaagaattaatggataat
acagaggtgatgcaaaatgctcgtagtatattagcaggactccctgatcttgaaagatta
ttaagcaagatccatgcacaaggaaatgcggcgaaaatgaataatcatccagacggcagg
gcgattatgttcgagggtcaaatgtattcaaagaaaaagattgcagattttattgttact
ctgagtgcgttcgaggatgttctaaaaattgttgctttgttcgaagatttcaagagtact
ataataagtcgatgtactaaaatagagccgaatggcgagtttccttcattaagagaatca
ttagattatttcaagactgcattcgatcacgaagaagccaaaaagacaggctgtattgtt
tcaaagagaggagtcgatagtgagtacgattctgttttaatagaattggatgatgtaaag
gcagatgcccaaaagtaccttgaaaagcaaaaacagcacttcggcgtgaaagtcgcgttt
tatggatcggataagaaacgttatcaaatcgagattccagattctcaaataaagaaaatt
ggtgccgggtatgagcttcaatcacaaaggaaaggatacaaacgctattacactgccgag
actaaggaacttttaagtcgacaaataaacgccgaagaacacagagataaagtactaaag
gatttaaacagaagaatatttgcaaaatttagcgagaagtatgatatatggaatatggcg
gtttataagttgtctgtcttggatgttcttatctctttggcggaatacgccctcagcgga
gatatgtgtataccagaagttaacgatggtacagacgaaagggtatttatcgatattcga
gacggatggcatccatgtattatctccgatacatttataccaaataacactttactagga
actgaaaattctgcttcttttatgattcttactgggccgaatatgggtggtaaatcaaca
ttgatgcgtcaggtcgcccttcttactataatgacgcaaattggaagttacgtccctgca
agttcctgccgtttgacattagtggatcgtattttcacaaggctcggcgcaaatgatgat
attctagctggtcagagtacgttcttggtagagttgagcgaaactgctgcgatattacag
cacgctacgccatactcgctagtgttgcttgatgaattgggtcgtggtacgtcgacgtat
gacggcacggcaatagccgcttcagttgtgaatgcacttacaaaattgaattgccgtact
ctattttcgacacattatcattctttggtagaagattataagaacacaaaggaaattaca
ttggcccatatggcatgtatggtagaaaatgaggaacaggatgaagtgtctcaggaaaca
gtaacatttttgtacaaacttagcgagggagcttgtccgaaatcatacggttttaacgct
gctcgattagctggcatcccatctgtaattacaaacagagcgcatgagatctcaaagaaa
ctcgaacaagagacaaattataaacatctcttcaccagcctatgtaaggcgaatgggaca
gccataagggatctaatcgctgcaatgtga
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