KEGG   Bombus huntii (Hunt bumble bee): 126867543
Entry
126867543         CDS       T10446                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
bhun  Bombus huntii (Hunt bumble bee)
Pathway
bhun03013  Nucleocytoplasmic transport
bhun03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bhun00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126867543
   03015 mRNA surveillance pathway
    126867543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhun03019]
    126867543
Messenger RNA biogenesis [BR:bhun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     126867543
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 126867543
NCBI-ProteinID: XP_050478076
LinkDB
Position
7:2943846..2948501
AA seq 803 aa
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTIDEVTDNAVESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNVSNKNRKFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVQNFPPLQAQGDSLKSKSSNTSNTHTNENKAPNEPTNPAWKKDTKHSSHIQSSNGN
SGAGGDADKLINTKISSRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTVEIKPK
GRGTGSITTENKRNNIQNDDEQQITHDMKHISVTDGTQYHQSGRHNKSFYGQSSNQQRSG
TVPPRMQQQQPQQQQQQQSIQQQDGSANRPKRYSSLRQRSTVSDNPGPQNYPPQHGQHGQ
HNQHNQHNQHNQHGQHGQHGYFPPQAGNSRGVLDSQGYPQGHFEQTTSVATATAPMTGQP
VIPIPPNGQPASYAPPPFLVPPPQFISPQTAPPSIINYVPGPNGPAFQPNFQGYQGYSSP
VQPQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPENQHQTSRGRG
KTTQPQQTNQLGNTQQTEQEVKINSIESDQKTVPEQFDNTEIEQAEIQETEKIDGSSAIA
NPVVENTEKDIKILDIGTPLNLGDTTTDQLDDISANDSSKVTMKEENIISLKAMEPVIEK
AENDSNKVENTTTENTVVEEAVA
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtcggatacaagacgacgacgaaaatctaatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaacgcaacgaaagaaacccagagcagcgagcaaactgatggt
catcaggattcagaatgtgatatctatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggagatgggcaagaagaagaaaaaccgcagaaaaagctggatgat
gatgaagacagacgtaacccacaatatatccctaaaaggggaacattttatgaacatgat
gatagaaccattgatgaagtaacagataatgcagttgagtcacaaaatgagagagaaacc
aaagaaaaaaaagtatggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagaacaggcaccaaagagccatgaagaattaatagctgtttatggctatgacataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggccgtggtcctaacaaa
tatacacgtaattgggaagatgaagatgcatatggaaagcctggaagtaatgtttcaaat
aaaaatagaaagttcaatagaagtggagaagattttcctgctttaggaacaaataagaat
gcttccacacatgtagaagaaccagtaatttcatcagcttggtacagtagtaagaataag
tcacagaataaagtacaaaattttccacctctacaagctcaaggtgatagtctgaaatca
aaatctagcaatacgtctaatactcatacgaatgaaaataaggctcctaatgaacctaca
aatccagcctggaaaaaggatactaaacattcgtctcacattcagagcagtaatggaaat
agtggagctggtggtgatgcagataaattgattaatacaaagatatcttcaagagataat
aacaagaggaacgttcaagagtctgtaagcttggcagcgagtagaacacgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgaaatcaaaccaaag
ggacgcggaaccggatcgattacgactgagaataagagaaataatatacagaatgatgat
gagcagcaaattactcatgacatgaaacacattagcgttactgatggtactcaatatcat
caaagtggaagacataataaaagcttctatggacagtcctcaaatcagcagagatcagga
acggtacctccaagaatgcagcaacaacaaccacaacagcaacaacaacaacaatcaatt
cagcagcaagatggttctgctaataggccaaaacgttattcaagtttgcgacagcgatct
actgtttcggataatccaggaccacaaaattatccaccacaacatgggcaacatggacaa
cacaatcaacacaatcaacacaatcaacacaatcaacatggccagcatggtcaacatgga
tattttcctcctcaagctggaaattcaagaggtgttttagattcacaaggatatccacaa
ggacattttgagcaaaccacatctgttgctactgcaactgcacctatgactggtcagcct
gtaattcctataccacctaatggtcaacctgccagttatgctccaccaccatttttagta
ccaccacctcagtttatttctccacaaactgctccacctagtataattaattacgttcct
ggtccaaatggaccagcatttcaaccaaatttccaaggttatcaaggttatagttcacca
gtacagccacaacgtcctccacctccacaagaattgtttcaaccacaaggttgtacttac
tatagtccagcgcagcagcaacagcaacaacaacaatcagctccaatgagacgaccaaaa
gcagctattccaattcttccaccaccagagaatcaacatcagaccagtcgaggaagaggt
aaaaccacacagccacaacaaacaaatcaacttggtaatacacaacagactgaacaagaa
gttaaaattaactcaatagaaagtgatcagaagactgtgccagaacagttcgataataca
gaaattgaacaagcagaaattcaagaaacagagaaaatcgacggttcgagtgcaatagcg
aatcctgtggttgagaataccgaaaaagatattaaaattcttgatatcggaacaccactg
aatttgggagatactactaccgatcaattagacgatataagtgctaatgattcatcgaaa
gtcactatgaaggaggaaaatattatttcgcttaaagctatggaaccagtcattgaaaag
gctgaaaatgattcaaacaaagtagaaaatacaacgactgaaaatacagttgttgaagaa
gcagtagcttga

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