Bombus huntii (Hunt bumble bee): 126867543
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Entry
126867543 CDS
T10446
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03013
Nucleocytoplasmic transport
bhun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126867543
03015 mRNA surveillance pathway
126867543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126867543
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126867543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
126867543
NCBI-ProteinID:
XP_050478076
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All DBs
Position
7:2943846..2948501
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AA seq
803 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTIDEVTDNAVESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNVSNKNRKFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVQNFPPLQAQGDSLKSKSSNTSNTHTNENKAPNEPTNPAWKKDTKHSSHIQSSNGN
SGAGGDADKLINTKISSRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTVEIKPK
GRGTGSITTENKRNNIQNDDEQQITHDMKHISVTDGTQYHQSGRHNKSFYGQSSNQQRSG
TVPPRMQQQQPQQQQQQQSIQQQDGSANRPKRYSSLRQRSTVSDNPGPQNYPPQHGQHGQ
HNQHNQHNQHNQHGQHGQHGYFPPQAGNSRGVLDSQGYPQGHFEQTTSVATATAPMTGQP
VIPIPPNGQPASYAPPPFLVPPPQFISPQTAPPSIINYVPGPNGPAFQPNFQGYQGYSSP
VQPQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPENQHQTSRGRG
KTTQPQQTNQLGNTQQTEQEVKINSIESDQKTVPEQFDNTEIEQAEIQETEKIDGSSAIA
NPVVENTEKDIKILDIGTPLNLGDTTTDQLDDISANDSSKVTMKEENIISLKAMEPVIEK
AENDSNKVENTTTENTVVEEAVA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacaagacgacgacgaaaatctaatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaacgcaacgaaagaaacccagagcagcgagcaaactgatggt
catcaggattcagaatgtgatatctatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggagatgggcaagaagaagaaaaaccgcagaaaaagctggatgat
gatgaagacagacgtaacccacaatatatccctaaaaggggaacattttatgaacatgat
gatagaaccattgatgaagtaacagataatgcagttgagtcacaaaatgagagagaaacc
aaagaaaaaaaagtatggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagaacaggcaccaaagagccatgaagaattaatagctgtttatggctatgacataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggccgtggtcctaacaaa
tatacacgtaattgggaagatgaagatgcatatggaaagcctggaagtaatgtttcaaat
aaaaatagaaagttcaatagaagtggagaagattttcctgctttaggaacaaataagaat
gcttccacacatgtagaagaaccagtaatttcatcagcttggtacagtagtaagaataag
tcacagaataaagtacaaaattttccacctctacaagctcaaggtgatagtctgaaatca
aaatctagcaatacgtctaatactcatacgaatgaaaataaggctcctaatgaacctaca
aatccagcctggaaaaaggatactaaacattcgtctcacattcagagcagtaatggaaat
agtggagctggtggtgatgcagataaattgattaatacaaagatatcttcaagagataat
aacaagaggaacgttcaagagtctgtaagcttggcagcgagtagaacacgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgaaatcaaaccaaag
ggacgcggaaccggatcgattacgactgagaataagagaaataatatacagaatgatgat
gagcagcaaattactcatgacatgaaacacattagcgttactgatggtactcaatatcat
caaagtggaagacataataaaagcttctatggacagtcctcaaatcagcagagatcagga
acggtacctccaagaatgcagcaacaacaaccacaacagcaacaacaacaacaatcaatt
cagcagcaagatggttctgctaataggccaaaacgttattcaagtttgcgacagcgatct
actgtttcggataatccaggaccacaaaattatccaccacaacatgggcaacatggacaa
cacaatcaacacaatcaacacaatcaacacaatcaacatggccagcatggtcaacatgga
tattttcctcctcaagctggaaattcaagaggtgttttagattcacaaggatatccacaa
ggacattttgagcaaaccacatctgttgctactgcaactgcacctatgactggtcagcct
gtaattcctataccacctaatggtcaacctgccagttatgctccaccaccatttttagta
ccaccacctcagtttatttctccacaaactgctccacctagtataattaattacgttcct
ggtccaaatggaccagcatttcaaccaaatttccaaggttatcaaggttatagttcacca
gtacagccacaacgtcctccacctccacaagaattgtttcaaccacaaggttgtacttac
tatagtccagcgcagcagcaacagcaacaacaacaatcagctccaatgagacgaccaaaa
gcagctattccaattcttccaccaccagagaatcaacatcagaccagtcgaggaagaggt
aaaaccacacagccacaacaaacaaatcaacttggtaatacacaacagactgaacaagaa
gttaaaattaactcaatagaaagtgatcagaagactgtgccagaacagttcgataataca
gaaattgaacaagcagaaattcaagaaacagagaaaatcgacggttcgagtgcaatagcg
aatcctgtggttgagaataccgaaaaagatattaaaattcttgatatcggaacaccactg
aatttgggagatactactaccgatcaattagacgatataagtgctaatgattcatcgaaa
gtcactatgaaggaggaaaatattatttcgcttaaagctatggaaccagtcattgaaaag
gctgaaaatgattcaaacaaagtagaaaatacaacgactgaaaatacagttgttgaagaa
gcagtagcttga
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