Bombus huntii (Hunt bumble bee): 126868364
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Entry
126868364 CDS
T10446
Name
(RefSeq) uncharacterized protein LOC126868364 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
bhun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126868364
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126868364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
126868364
NCBI-ProteinID:
XP_050479654
LinkDB
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Position
8:5867540..5878176
Genome browser
AA seq
1901 aa
AA seq
DB search
MTSTKSKEIADEYISSLSDLTINSKPLINMLTMLAEDNIEHAPAIVQAVENHLQKVRSDI
KLPVLYLIDSIVKNVNGAYLNLFTQNIVNTFCGVFEKVDENTRASMWKLRQTWNDVFPAK
KLFSLDVRVQSIDPAWPITASPTSVSSGSIHVNPRFFSMPQQSATSIVSQPIVAPVKLPP
GDPVTPTEAAMREQLLKKQRELIELQKKKIELELLQAKANLEQQQRQLDKQAGNLKAELV
AVTTHITPSTETVTQGKPVATTVPSQASKQVAKQFPAAAASLLKNAGTNNGPRIAPASSI
AVASAKPVSRDPRLKTTSAQDVPVSSVDPRQRISTPTQKDSRGEGQAQLAAHTNTVLSDQ
LKQQLLSKQAVTSTINKSPTNLAGSDTATLNASNNNNANTNLNNNNNNKNFSGNANKDAV
SHRTSQKKDPRLSSNSSGNLNSNNSKGSQSLSVGSNSSLSASNRGGGNNDSKSKDSKSSN
SRTSSSSAIDKSASSKSSHRKLGNKSRSKQPQTSPCKIPKVDRDASPVRSKSREKDSGDS
SPSSRTSPQSFQNSKNRKKNTKSRKRSPSPPYRIPRRNDAKSNLSLSNSSGVTEEEQSGS
LIVSPPHPPTFKEIRPNARQRNYVRRNKDGSLSPERSPANAGNVQTAVEPTLESSSKDED
LRATLPLPGAAASVLEKKEDLDLRVLPPAVNSNKRQTTEHMESTLVKKTKAEKFDALFGN
EDVDLRTLTHPKAGRPPTPPPPVISGEDGKDGWAKLKTPSKNDREKQANNTDDKRDARDR
NRDRLGRLRLYNKLPDDPKERRRTLSNEDQDNRSGRRGRENDKPEKNEDRNIEIIMKQAA
EQLNQGSITKTQYNTLIQEVLHMSEDRKLRAAQRKEKEVGSIVWEKGVNLDIAGPGERTS
TFSPSGDKEMMRNKDHPIARNPNGPRWQNQPWQQPGPWAHPPGPPYGGPQGHFNSDFRPV
GPWQNPRHFGPMRPDYQYHGGFNHSIGPNPRLGPGMMGPMGPNGPLMSNLLPNGPIGPMG
MPNPPISLPGMNGPGMMINNGPMTSLISNTNMSSLNASRNVSPSSSSKYDIEDGDQNYTT
TMIKNPNPHSRELPPPDSKLLDEIARDTMKSIDIDIQHIPREIRYYGQTGVVFMNWDDPR
EIGFQDGIRRILIDDKITITCAFNDNYKEFIYEGEVHRIKLGAPTRELYIDDRWYECYFG
GMPITVDLGGKKVSVKLEGPPPLVKIGTVKRTDLVVAKINLIINARNMVPVFLDAKPQIF
EIEGKPHTLEFIDSLQTVLLNGRPFKVEFGGLPKPIIVRDKKHFIRFSVLPRGVRPGYVK
IAGMKGEEPIEAPPTPPLLTQKPKVDAASTPTQFSAVEHESTSQDGSDLRSTPKPDLQLD
VLSSALPSAMAPSSGLSYQAEPAENPPTTAPPLSLPLNMNELFQRLVETGIVSNLSEQKK
QEEEEKKEPEIIPVSFDKPETLKVKQPAIAAALYSGMQCSSCGARFAPELATRYSHHLDW
HFRQNRRERDSARKAHSRPWYYDVSDWIQFEEIEDLEDRVQSWFETEKQTADTEGITAED
SPQEASQPSVPTGTDEDSRCQVCHDAFEQFYNEEKEEWHLRPAINFEGKNYHPLCLDDYK
EKSLVRALEKSALEETIEEMEDEKKESSDETFAEENKTDELSMEALKTEFETVEPSDEII
EDKVPEESTEMETKEEETIIEDNADIEQNEKMEEQELECSNKEDVDMESIEKEDSVETEI
PETENVDKSFENIKIKEEPIDEPEEQLEVEHFDFTNIEIKEEPIEQEPDPEESIITEPAT
VDTTYAAVKSSIDGNVELDSTPAAMPAAPSRIKINITKPLCINKEPEDSKEKEKPIVETP
TEEIIEPLVPASIKPTLQGRKLSNLPPVERGQELSGLCSIM
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaacaaagtctaaggaaatagcggatgagtatatctcatcgctgtctgatttg
actattaacagtaaaccattaattaatatgcttactatgttggctgaagataacatagaa
catgcaccagcaattgtacaagctgttgagaatcatctacaaaaggtgagaagtgatatc
aaattacctgtcctttacttgattgattcgattgtgaagaatgttaatggagcatattta
aatctcttcactcaaaatattgtaaatactttttgtggagtgtttgaaaaggtggatgaa
aatacaagagccagcatgtggaaattgaggcaaacatggaatgatgtatttccagcaaag
aaattattttctttggatgtacgagtgcaaagtattgatcctgcttggccaatcactgcc
tctcctactagtgtttcttctggatctatccatgttaatcctcgttttttttcaatgccc
caacaatcagcaacatctattgtctcacaaccaattgtagcacctgttaagcttccacca
ggtgatcctgtaacaccaacggaagcagcaatgcgagagcaattattaaagaaacagcga
gaactgatagaactacagaaaaaaaagattgaattagaattacttcaagctaaagctaat
ttagaacaacaacagcggcaacttgataaacaagctggaaatttaaaagctgaactggtt
gcagttacaacacatattacgccaagcacagaaactgtcacgcaagggaaacctgttgca
accactgtgccaagtcaagcatcaaagcaagtagcaaaacagtttccagcagcagccgct
tcacttctgaaaaatgcaggaacgaacaatggcccacgaattgcaccagctagtagtata
gcagtagcatcagctaaaccggtatctcgtgatccaagactaaaaactacctcggctcaa
gatgtaccagtttcaagcgtggatcctcgtcagcgaataagtacaccaactcagaaggat
tcgcggggtgaaggccaagcgcagttagcggcacatacaaacactgtactttcagatcaa
ttaaaacagcagttactttcgaaacaggctgtgactagcactatcaacaagtctccgaca
aatcttgccggctccgatactgcgacgttaaacgctagtaataacaataatgctaatacg
aacctcaacaataataataacaataaaaatttcagtggtaacgcaaataaagatgctgtg
tcgcatcgaacaagtcaaaagaaagaccctcgattgtctagtaatagtagtggtaaccta
aacagtaataattccaaaggttctcaaagtttatctgtgggtagtaatagttctttatct
gcgagtaatagaggaggtggaaataacgattccaagtcgaaagactcgaagagttcgaat
tctcgaacttcttcatcttcggcaatcgacaagtctgcttcctcaaaatcctcgcataga
aaactaggtaacaaatcgcgatctaaacaacctcaaacatctccgtgtaaaataccgaaa
gtcgacagagatgccagtcctgttaggtccaaatctcgtgaaaaagatagtggagacagt
tcaccatcctcgcgtacctctccccaatccttccaaaactctaaaaatcgaaaaaagaat
acaaaatcgagaaaacgcagtccaagccctccatatagaattcctaggcgtaatgatgca
aaatccaatttaagtctaagcaattctagtggtgttactgaggaggagcaatctggttca
ttgatagtctctcctcctcatccacctacatttaaagaaatcagaccgaatgctagacaa
agaaattacgtaagacgtaataaggatggcagtcttagtcccgagcgctctccagcaaat
gctggaaacgttcaaactgctgtggaaccaactttggaatcatccagcaaagatgaagac
ttgagagcgacactacctcttccaggtgcagccgcttctgtattagaaaagaaagaggac
ttagatttgcgtgtattaccaccagcagttaatagtaataaaagacaaactacagaacac
atggaatctacattagtaaagaaaacaaaagctgaaaagttcgatgcattatttggaaat
gaagacgttgatctgcgaacattaactcatcccaaagctggacgaccacctacaccgccc
ccacctgtaatatctggtgaagatggcaaagatgggtgggcaaaactaaagacaccatca
aagaatgacagagaaaagcaagctaataatactgatgataagcgtgatgctagagatcgt
aacagagatagattgggtagactgaggctttacaacaaacttccggatgatcctaaagaa
agaagaagaacattatcgaacgaagatcaagataacagatcaggtcgaagaggtcgagaa
aatgataaacctgaaaagaatgaagacagaaatatagaaataataatgaaacaagctgca
gaacaattgaatcaaggatccattactaaaactcaatacaatactctcattcaagaagtt
ttacatatgagcgaagatcggaaattaagagctgcacaacgaaaggaaaaagaagtaggt
tctattgtatgggaaaagggtgtaaatttggatatagcgggtccaggtgagcgtacttct
acatttagtccttctggtgataaggaaatgatgagaaacaaagatcatcctattgcaaga
aatccaaacggccctaggtggcaaaatcaaccatggcaacaaccaggaccatgggctcat
ccgccgggacctccttacggtggaccgcaaggacattttaattcagattttagaccagtt
ggtccatggcaaaatccaagacacttcggaccaatgcgacccgactatcaatatcacggt
ggcttcaatcattctattggtccaaatccacgattaggacctggaatgatgggacctatg
ggacctaatggtccgctcatgtcaaatttattacctaatggtccaattgggccaatgggc
atgcctaatccacctatatcattaccgggaatgaacggacctggaatgatgataaacaat
ggaccaatgacaagtcttatatcaaatacaaatatgtcatcattgaatgcttcaagaaac
gtatcgccaagttcgtcttcgaagtatgatatcgaagatggcgatcaaaattatactaca
acgatgataaagaatccaaatcctcatagtcgtgaattaccgccaccagactcaaaatta
ttagatgaaattgcaagagatactatgaaatctatagatatagacatacagcatatacca
cgtgaaatcaggtactacggtcaaactggagtagtttttatgaattgggatgatccaaga
gaaatcggatttcaagatggtatacggcggattttaattgatgataaaatcactataacc
tgtgcatttaatgataattacaaagaatttatttatgaaggtgaagttcatagaattaaa
ttaggtgcaccaacgagagagttatacattgatgataggtggtatgagtgttatttcggt
ggtatgccaataacagtagatcttggtggtaaaaaggttagcgtaaaattggaaggacct
ccaccccttgttaagattggtactgtaaagagaacagacttagtagttgccaaaattaat
cttattattaatgcccgaaatatggttcctgtatttttagatgcaaaacctcaaatattt
gaaattgaagggaaacctcatacacttgaatttatagactcgttacaaacagttctttta
aatgggcggccatttaaagtggaatttggtggactgcctaaaccaattattgttagggat
aaaaagcattttataagattttcggtactgcctagaggtgtccgaccaggatatgttaag
atagcaggtatgaaaggtgaagaacctatcgaagcaccacctaccccgcctctattgaca
caaaagccgaaagtggatgcagcttctacaccaacgcagttctctgctgttgaacatgaa
tcaacgtcacaagatggttcggatcttagatctactcctaaaccggatttgcaattagac
gtgttatcttcagctttaccatctgcaatggcaccatcgtctggattatcttatcaagct
gaaccagctgaaaatccacctacaactgctccaccattatcattaccgctgaatatgaat
gaactgtttcagagattagtagagactggtattgtatcgaatctttctgaacaaaagaaa
caagaagaggaagaaaagaaggaaccagaaattattccggtttcatttgataaaccagaa
acacttaaagttaagcaaccggctattgcggcagcattgtacagtggcatgcagtgtagt
tcttgtggtgccagatttgcaccagaattagcaactcggtatagtcatcatttagattgg
cactttaggcaaaacagacgagaaagagattctgcaaggaaggctcattcacgaccttgg
tattatgatgttagtgattggatacagtttgaagaaattgaagatttagaagatagagta
caaagttggtttgaaacggaaaaacagacggctgatacggaaggtattacggccgaggat
tctcctcaagaagcctcacagcctagtgttcccactggaactgatgaggattctagatgt
caagtatgtcatgatgcatttgaacagttttataatgaagaaaaggaggagtggcatcta
agaccagcaattaactttgaaggaaagaattatcatccattgtgtcttgatgattacaag
gaaaagagtctcgtgagagctttggaaaaatctgcgcttgaagaaacaatagaggaaatg
gaggatgaaaaaaaggagagctcagatgaaacattcgctgaagaaaataagactgatgaa
ttaagtatggaagcattaaaaactgaatttgaaacagtagaaccgtcggatgaaataata
gaagataaggtaccggaagaatctactgaaatggagactaaagaggaggaaactataatt
gaagataatgcagatattgaacaaaatgaaaaaatggaagaacaagaattagaatgtagt
aataaggaggatgttgatatggaaagtatagaaaaagaagattcagtcgaaacagaaata
ccagaaacagaaaatgtggataaatcctttgaaaatattaaaattaaagaagaaccaatt
gacgaacctgaggaacaattagaagtggaacatttcgattttactaacatagaaattaaa
gaagaacctattgagcaggaaccagatcctgaagaaagtataataactgaacctgcaacg
gttgatacaacatacgcagctgtgaagagttctatagatgggaatgtagaattggattct
acgcctgcggcgatgccagcggctccatctcgaattaaaatcaatattacgaaaccattg
tgtatcaataaagagccagaagattcaaaggaaaaagaaaaacctatagttgagacacct
actgaagaaataatagaacctttggtgcctgcttctatcaaacctactttgcaaggtaga
aaactttcaaatttacctcctgtggaaagagggcaagagttatcaggactctgctcaatt
atgtaa
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integrated database retrieval system
