Bombus huntii (Hunt bumble bee): 126868542
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Entry
126868542 CDS
T10446
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03022
Basal transcription factors
bhun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126868542
09124 Replication and repair
03420 Nucleotide excision repair
126868542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhun03021
]
126868542
03036 Chromosome and associated proteins [BR:
bhun03036
]
126868542
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126868542
Enzymes [BR:
bhun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126868542
Transcription machinery [BR:
bhun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126868542
Chromosome and associated proteins [BR:
bhun03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126868542
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126868542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
126868542
NCBI-ProteinID:
XP_050480051
LinkDB
All DBs
Position
8:complement(10271276..10275133)
Genome browser
AA seq
759 aa
AA seq
DB search
MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETESKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQFMPPGIYSIDDL
KEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE
TDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQESPAAFLRD
VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPVILVTHLATLVSTYTKGFTIIVEP
FDDKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIRACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRMDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEYGKIEQKAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgttgacggcttacttgtatattttccttacgattacatttatccagaa
caatatgcatatatgcttgagctcaaacgtggcctggatgctaaagggcactgtttattg
gaaatgccatcaggcactggaaaaactataactttgttatcattaattgtagcatatatg
ttggaaaatccattggatgtgacaaaattaatttattgttcccgtactgtaccagaaata
gaaaaagtcatagaagaattaaaaaagcttatggattattatgaaaaagaaacagaaagt
aaacctaaaattgttggcttagttcttagttcacgaaaaaatatgtgtattcatccagag
gtaagcagagaacgtgaaggcaaaattgttgatggtcgttgtcattctctcacagcatca
tatgttcgtgagagacataactatgatgaatcaacaccaatttgtaatttttatgaagga
tttgatatggaaggtaaagaacaatttatgccaccaggcatatattccattgatgatttg
aaagaatatggaagagaccgcaattggtgtccatattttcttgcaaggtttacaatttta
catgcccagattgtagtgtacagttatcattatttattagatcccaagattgcagaaact
gtgtcaaaagaattaagcaaaagttctgtagtagtatttgacgaagctcacaatatagat
aatgtatgcattgattcaatgagtgtaaaaattaatagaagaactttagaaaaaagttca
gccaatatacaacttcttgaaaaaacagtggctgagatgagagaagatgatgtaaataaa
ttaaaagaagaatatgagagattagtagaaggattaaaagatgcacatgttgcaagagaa
acagatattatcttagctaatcctgtcttaccagatgaaattttgcaagaggtggttcct
ggtaatattagaaatgcagaacattttgtcggttttttaagacgatttgtagaatattta
aaaacgcgtctacgtgtgcaacacgtagttcaagaatcacctgctgcgtttctgagagat
gttcaaacaaaagtttcaatagaacgtaaaccattaagattttgtgcagaacgactagct
tctcttttacgtactatggagataaccgatttaaccgatttttcaccagttatattagtg
acacatctggcaacattagtatctacatatacaaaaggatttacaattattgtggagcca
tttgatgacaaaacacctaatgttttaaatccaattcttcattttgtttgtttagattcg
tctattgcaataaaacctatatttgatagatttcagtcagtagtaattacttcaggaaca
ttatctccattagacatgtatcctaaaattttaaattttcatccagtcataatgtcatct
tttactatgacattagccagaccttgtctcttaccaatgattgtagcgaaaggtaatgac
caagttgcaatttcgtcaaagtatgaaacaagagaagatgttgctgttataagaaattat
ggtcaactattagttgaatttgcagctactgttcctgatggtttagtctgtttttttacc
tcctacttatacatggaatctgtcgttgctgcatggtatgatcaaggtgtggtagatcaa
cttcaaagacacaaattactatttattgaaactcaggattccgcagaaacgagtttagct
cttataaattacatacgagcatgtgaaaatggaagaggtgctgttctcctttctgtggca
cgtggtaaagtatcagaaggagttgattttgatcatcatttgggaagagctgttttgatg
tttggaattccttatgtgtatacacaatcgcgtattttaaaagcacgactagaatatctt
cgtgaccaatttcaaatcagagaaaatgattttttaacttttgatgcaatgagacacgca
gcacaatgcgttggaagagcaattagaggaaaaactgattatggtataatggtatttgca
gacaagaggttttcgagaatggataaacgaagtaagttaccaaaatggatacaagaacat
ttaactgatagtttatgtaatttatcaaccgaggaagctgtgcagataagtaaacgttgg
ttacgacaaatggcccaaccatttacacgtgaaaatcagttaggattatccctattgaca
cgagaacaacttgaaaaagaagaatatggtaaaattgaacagaaggcgcaacaaaattag
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