Bombus huntii (Hunt bumble bee): 126868898
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Entry
126868898 CDS
T10446
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03022
Basal transcription factors
bhun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126868898
09124 Replication and repair
03420 Nucleotide excision repair
126868898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhun03021
]
126868898
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126868898
Transcription machinery [BR:
bhun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126868898
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126868898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
126868898
NCBI-ProteinID:
XP_050480830
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Position
8:complement(807474..810221)
Genome browser
AA seq
467 aa
AA seq
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MSNTISGKNLLRPAGLQCKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLHFEEHQKVVLILNELNVWKEASIPGGLPGWILNTTFKKNL
KIVLLGGGKPWTMSNQLEIDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLSTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAAQIVGYLQQHAHGKMIEAGPPVLPPTIVDQIKLWENERNRFIFSEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQNERKRTIVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatacaataagtggaaaaaacttgttacggccagctggattgcaatgtaaaaat
cttcaagaatatttaaaatcacgtccaccagaagtattaaacaaattatatcataatcct
ccaatttgcttggctgtgtttcgggaattgccagtaatagcaaaacattatgttatgcga
ttattatttgttgaacaacctgtacctcaagcagttattgcctcttggtgttctaaactt
cattttgaggaacatcaaaaagtagttttgatactaaatgaactaaatgtatggaaagaa
gcatcaataccaggtggactacctggatggattttaaatactacattcaagaaaaactta
aaaatcgttcttttgggaggtggaaaaccatggacaatgtcgaaccaattagaaattgat
agtaaacctagagatgttgcatttttagattcatatgcattagaaaggtgggaatgtgtt
ttacattacatggttggttcacaacagcaagaaggtatatctgctgatgctgttagaatt
cttttacatgctggcttgatgaagcgagatgaagctgatggaagcccagttattacacaa
gcaggttttcaatttttgttattggaaactgcatcgcaggtgtggtattttattttacaa
tacctagatacaatagaagcaagaggacttgacctagttgaatgtcttacttttttattt
caattaaatttctcgacacttggtaaagattatagtactgaaggaatgtccgaaggtctg
tcaacatttttacaacatttaagagaatttggtttggtttatcaaagaaaacgaaaagct
ggaagattttatcccacaagattagcattaaatattgcaactggacaaaataaaccattg
tctagagatccagagaaggagggttacattgttgttgaaacaaattacagagtatatgct
tatacaaactcgaatttacaagtagctttacttggattattttgtgagatgttatatagg
tttccaaacctggttgtgtcaatattaacaagagattctgtacgtcaagctctgaaaagt
ggaattactgctgcccaaattgtaggttatttgcagcaacatgctcatggtaaaatgata
gaagcaggtcctccagttttaccaccaactatagtagatcaaattaaattatgggaaaat
gaaagaaatagattcatatttagtgaaggagttttatatagtcagtttctttctcaaact
gattttgaagtgcttagagatcatgctctttctactggagtactaatttggcaaaacgaa
aggaaacggactatagtagttacgaaagcaggtcatgacgacgtaaaaaaattttggaaa
cgatattccaaaggttccagttag
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