Bombus huntii (Hunt bumble bee): 126869375
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Entry
126869375 CDS
T10446
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126869375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126869375
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126869375
mRNA degradation factors
5'-3' decay
Decapping complex
126869375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ELFV_dehydrog_N
Motif
Other DBs
NCBI-GeneID:
126869375
NCBI-ProteinID:
XP_050481794
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Position
9:15559551..15564263
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AA seq
1079 aa
AA seq
DB search
MKMIKTGEDNLNLQYQQTVEFTGQENQHSVELYSSNVVVIPSPGGHNHGSSKVKLKNIVD
FTWEHNFYPGQLLAVHMSGKYLAYGIKVGNGGGMVRVVYKELEQRALLRGMRAAIQDLAF
AHVSNAILACVDYLGNLFIHTIESTPPELLCSLLLQVDAEDISPTSHRVIWCPYIPEDVP
SDGDKVSKLLVLTRGSKVELWSVNTVSARFRSIEAIDPAVKENGGMLEIDQHSDTIIEAT
FSPDGTALATASFDGEVKFFQVYLHSNSHGNQVQPRCLHQWRPHGGRPISCLFFLDDHKT
YHPEVQFWRFAITGCDNNTELKVWSCEVWSCLQTIKFAPTPSTGKLPVLKAGLDLSAGYL
LLSDIYNKVLYILSLTKDNDEITSVNTISEFLLPYPILSFGIVDAGLCKMRPTGESLEDL
CPCEEDTEEQLVIRMYLVQPKSLQECHITFKPASQVSGNCLMDTLTHKSLGYSEDTRDMG
NVNHNGISVENCEENRSLSATLEATTNHNAGLNLMTPDAFSSPAKKENNELDSRPSSPEL
GKVLSASPSLAQAVQALNATDPPLATNELEEQAPASSGSSPSREVREILSLTKADEEPEP
ENKPKDTNTADEDWPNIPMVLLKDVSRHAMQEADGFTNDEEKRKRLKDESKPTTHTTGNT
ENTWQTTNELNTLELINKVESILEIIQDQRQELRELSTEVTRLRQETPISTRVESALARA
SQQLNATLEQTLYSQMARQHDFLKTLETAMKDKIETTLPRIIEDTVEPLKHQLRLDSARM
DELLKKNLTELINSNHIKDTLAMAAVNAAKPALDAAFKETFTNVLLPGMEKACQTMFKQV
QDAFVRGTREYLQNVDAIADKQYQQRNEQQSEALSALVREELQTELNRGLIILQEGTIRT
IRDSIRDNLNQQLTEITNARSRATTPAIPVSAVADAQARVISLLQRGQLNAAFQQALSAS
DLGLVVLVCEKTEPSRVFSSVGPQGQTSRCILQQPVILSLVQQLSADLGHRTELKHRWLE
EAILNLDPNDPVTREHMGTVLMTLQSQLAAFVAANPSHSSIRRMKMLAMAARALFNQQP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaaaacgggagaggataacctaaatcttcaatatcagcaaacagtagaa
ttcactggacaagaaaatcaacattcagttgaattatatagtagcaatgttgttgttatt
ccttcaccaggaggtcataatcacggtagttcaaaggtgaagttaaaaaatattgttgat
tttacatgggaacataacttttacccaggccaattattagctgttcatatgtctgggaaa
tatttagcttatggcataaaagttggtaatggaggaggtatggttagagttgtatacaaa
gaattggaacaaagagctctgttaagaggaatgcgtgcagcaatacaagatctggctttt
gcacatgtttctaatgcaattttggcatgtgttgattatttgggaaacctttttatacat
accattgaatcaacaccaccagaattgttatgtagtttattgctacaagtagatgcagaa
gatatatctcctactagtcatcgtgtgatatggtgtccatatattcctgaagatgtacca
tcagatggagataaagtttcaaagcttttagttctaactcgtggttccaaagtagagttg
tggtcagttaatactgtttcggcaagattcagatcaatagaggcaattgatccagctgtg
aaggaaaatggaggcatgttggaaattgatcaacattctgacacaatcatagaagcaaca
ttcagtccagatggcacagccttagctacagctagttttgacggagaagtcaaattcttt
caagtttacttacatagtaattctcatggtaatcaagtacaacctcgttgtttacatcaa
tggagaccacatggtggacgaccgatttcctgcttgttcttcctagatgaccataaaaca
taccatccagaagttcagttttggaggtttgccataactggatgtgacaataatacagaa
ttaaaagtttggtcttgtgaggtatggtcctgtttacaaaccattaaatttgcacctaca
ccttctaccggtaaattaccagtgttaaaagccggcttagatcttagtgcaggatacctt
ttattatcagatatatacaataaagttctgtacatattaagtcttacaaaagataatgat
gaaataacatcagtaaatacaatatcagagttcctcctcccgtatccaatactgagtttt
ggaattgttgatgctggtttatgtaaaatgcgtcctactggagaatcgctggaagactta
tgtccttgtgaagaagatactgaagagcaacttgttataaggatgtatctagttcaacca
aagtcattacaagaatgtcatatcacttttaagcctgcctcacaagtgagtggtaactgc
cttatggacacactaactcataaatcactgggctactctgaagacacacgagatatggga
aatgttaatcataatggaatttcagtggaaaattgcgaagaaaatcgttccttatctgcc
acacttgaggcaacaacaaatcacaatgctggcttaaatttaatgacgccagatgcattc
agctcgcctgccaaaaaagaaaataatgaattagattctcgccctagtagcccagaatta
ggtaaagtgttatctgctagtccctcacttgcacaagcagttcaggctctaaatgcaaca
gacccaccattagccacaaatgagttagaagaacaagcacctgctagtagtggtagtagc
ccgtcgagagaagtaagagaaattttatctcttacaaaagcagatgaagaaccagaacca
gaaaataagccaaaagataccaatactgctgatgaagattggcctaatatcccgatggta
ttattaaaagatgtaagcagacatgccatgcaggaagccgatggattcacaaatgatgaa
gaaaaaagaaaaagattaaaagacgaatcgaaaccaacaacgcatactacaggaaatact
gaaaatacatggcaaacaacaaacgaattgaatactctcgaactaataaataaagtagag
tcaattttggaaataattcaagatcaacgacaggaattaagagagttaagtactgaagtg
actagattaaggcaagagacaccaatttcgacgcgagtagaatctgctttagcacgagct
tcacagcaactaaatgcaaccttagaacaaacattatatagccaaatggctcggcaacac
gattttcttaagacacttgaaacagcaatgaaagacaaaattgaaactaccttaccacgt
attattgaagacacagtagagccattaaagcatcaacttagattagattctgctcgaatg
gatgaactcttaaaaaagaatttgacagaactcattaatagtaatcatataaaagacaca
cttgctatggcagcagtgaatgcagcaaaaccagcattagacgcagcatttaaagaaacc
tttacaaatgttcttttacctggcatggaaaaagcatgtcaaacaatgtttaaacaagta
caagatgcttttgttaggggtactcgtgaataccttcaaaatgtggatgcaattgcggat
aaacaatatcagcaaagaaatgaacaacaaagtgaagcgctatccgcattagttcgcgaa
gagttacaaacagaattaaatagaggtttaattattctccaagaaggaacaatacgtaca
attcgtgattctattagagataatttaaaccaacaacttactgagatcacaaatgcgcgt
tctcgagctactacacctgctataccagtatcagcggttgctgatgctcaagcgcgagtt
atatctctcctccaacgaggacagttaaatgctgccttccaacaagctctaagtgctagt
gatttaggcttggtagtactagtttgtgaaaaaacagaaccttctagagtattttcttct
gtaggacctcaaggtcaaacctcaagatgtattttacaacaacctgtaattctttcactt
gtacagcagttatccgcagatttaggacaccgtacagaactgaagcataggtggcttgaa
gaggcgatattaaatttagatcccaatgatccagtaacacgagaacatatgggtactgtg
ttaatgactttgcaatctcagttagctgcttttgtagcagctaatccaagtcatagttct
atacggcgtatgaaaatgttagctatggctgcccgtgcactttttaatcaacaaccttga
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